Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1062 ATGGCATTTTCTCACACTGCTAAACTATCAGAGTTTCAAATTCCTCTCAAACCATCATCAGTGTCACACTCTCTCAACTCTTCCACTCTCACCCATCTCTCTCTCTCTAATTCTAAATCCTCATTTCGCACTCTCACTCTCTCTTCTCTCCGAACCACCAACAAGTCCTCACCAAAACCCAACCTTTCCGCCCCTTGGCTTACCAAAACGCCCTCTCCCAACCCTTCTCCCAAAAGGGTCTCCGAATCCACCGCCGACGACCCAATTCACCGGAAAAACGATAAAGGGAAAAACGCCGTCGAGAGAATCGTTCTACGGTTACGGAACCTGGGTTTAGTTTCAGAAGAAGAAGAGCAACAAGAAGAAGAGGTTGAGGTCAACAATGTGTTACCGGTGACCGGAGAAGAGAGGCTAGGGGAGTTGCTGAAGCGAGAATGGGTTCGGCCAGATGCTATGTTGGTTAGTGATGATGATGAAGAGGAAGAGAGTGAGGAAACGGTGTTACCATGGGAGAGAGAGGAAGAGAAGAAGGCGGTGGTTGTGAGTGTGGGTGAAGAGGGGTTGAGGAAGAGAAGGGTAAATGCTCCGTCTTTGGCTGAGTTGACTCTTGAGGATGAGTTGTTGAGGAGGTTGAGGAGAGAAGGGATGCGTGTGAGAGAGAGGGTTAGTGTCCCCAAAGCTGGTCTCACTCAGGATGTGATGGATAAGATTCATGAGAGGTGGAGGAAGGAGGAGTTGGTGAGACTCAAGTTTCATGAGGAACTTGCAAGGGACATGAAGAAGGCTCATGAGATTGTTGAGCATCGAACAGGAGGGTTGGTTACCTGGAGGTCGGGAAGTGTTATGATGGTGTATCGTGGTACTGATTACCAAGGGCCCGACTCGCGGAAAGAGCTCAATGAAAAGGAAGGTGGTGACTTTTTTGTGCCGAATGTCTCGTCAGCAAGTTTGTTGAAAACTGAAGATGGTAATGCAACTTCATCCGTGGAGAAGAATGAGCCGGTTGTGAGGAATAGAGAACAGCCTGAGAACATGAAAGAGGCAGAAGCAGAGTACAATGCTCTACTTGATGGTTTAGGTCCTCGTTTTGTTGGATGGTGGGGTACAGGAATACTTCCTGTTGATGCTGATTTACTTCCCCGGACAGTTCCAGGTTACAAAACACCTTTTAGGCTTCTTCCTACCGGAATGCGTTCTCGGCTAACAAATGCAGAGATGACTAATTTAAGAAATCTTTCAAAATCACTTCCTTGTCATTTTGCCTTGGGGAGAAATAGAAATCACCAAGGTCTGGCATGTGCTGTTCTTAAGCTTTGGGAGAAAAGTTTAGTTGCAAAGATTGCTGTCAAACCTGGGATTCAGAACACAAACAATAAATTAATGGCTGAAGAGCTGAAGATGTTAACAGGAGGTACCTTGCTGCTAAGGAATAAATATTTCATTGTTATATATCGTGGGAAGGACTTTCTTCCAACAAGTGTGGCGGCAGTTCTAGCTGAAAGAGAGGAATTGACAAAACAGGTACAGGATGTCGAAGACAAGGTTAGGTGTGGAGCAGTTGACGCAATTCTGTCAAGGCAAGGTGAAGGAATAGCACCAGCCGGATCTCTAGCAGAGTTTTATGAGGCCCAGGCTCGATGGGGAAGGGATGTATCTGCTGAAGAACGTGAGAAGATGGTGGAAGAAGCTGCCAAAGCCAAGACTGTTAAGCTTGTCAGACAAATCGAACACAAACTATTCGTTGCCCAAGACAAAAAGCAAAGAGCAGAAAAGCTTTTAGCCAAGATAGAAGCATCTATGGTTCCAGCTGGTCCTGATTATGACCAGGAAACAATCACAGATGAAGAACGAGTTATGTTCCGCAGGGTTGGTTTAAGAATGAAGCCGTACTTACCACTTGGTGTACGTGGTGTTTTTGATGGTGTTGTTGAGAATATGCATTTGCATTGGAAACACCGAGAACTTGTAAAATTGATAACAAAACAGAAGACTCTTGCTTTTGTTGAGGACACAGCAAGGTTACTAGAATATGAGACTGGTGGAATATTGGTGGCAATAGAGAGAGTACCCAAAGGGTTTGCTCTTATTTACTATCGTGGAAAGAATTATAAACGACCCATTACCCTGAGGCCTAGAAACCTTCTAACAAAAGCAAAGGCATTAAAGCGTTATGTAGCCATGCAACGCCATGAGGCTTTGAGTCAGCATATTACTGAATTGGAAAAAAATATAGAACAAATGAATGAAGAACTTGGTTTGACTCAAGATTCAGATGTTGAAGATGGGTGGAGCGAAGAGGAAGAGGATCGTAACCAAATTGATAACATCTCAGAATTCACCCTGACCGAGGATGAAGATTCGGATGGTTTTGATGATGAGGAAGACACTGATTGGGAAGATGACGAGGACTCTTGA 2415 0.4489 MAFSHTAKLSEFQIPLKPSSVSHSLNSSTLTHLSLSNSKSSFRTLTLSSLRTTNKSSPKPNLSAPWLTKTPSPNPSPKRVSESTADDPIHRKNDKGKNAVERIVLRLRNLGLVSEEEEQQEEEVEVNNVLPVTGEERLGELLKREWVRPDAMLVSDDDEEEESEETVLPWEREEEKKAVVVSVGEEGLRKRRVNAPSLAELTLEDELLRRLRREGMRVRERVSVPKAGLTQDVMDKIHERWRKEELVRLKFHEELARDMKKAHEIVEHRTGGLVTWRSGSVMMVYRGTDYQGPDSRKELNEKEGGDFFVPNVSSASLLKTEDGNATSSVEKNEPVVRNREQPENMKEAEAEYNALLDGLGPRFVGWWGTGILPVDADLLPRTVPGYKTPFRLLPTGMRSRLTNAEMTNLRNLSKSLPCHFALGRNRNHQGLACAVLKLWEKSLVAKIAVKPGIQNTNNKLMAEELKMLTGGTLLLRNKYFIVIYRGKDFLPTSVAAVLAEREELTKQVQDVEDKVRCGAVDAILSRQGEGIAPAGSLAEFYEAQARWGRDVSAEEREKMVEEAAKAKTVKLVRQIEHKLFVAQDKKQRAEKLLAKIEASMVPAGPDYDQETITDEERVMFRRVGLRMKPYLPLGVRGVFDGVVENMHLHWKHRELVKLITKQKTLAFVEDTARLLEYETGGILVAIERVPKGFALIYYRGKNYKRPITLRPRNLLTKAKALKRYVAMQRHEALSQHITELEKNIEQMNEELGLTQDSDVEDGWSEEEEDRNQIDNISEFTLTEDEDSDGFDDEEDTDWEDDEDS* 805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1062 804 ProSiteProfiles CRM domain profile. 610 710 IPR001890 GO:0003723
Apr6g1062 804 MobiDBLite consensus disorder prediction 779 804 - -
Apr6g1062 804 MobiDBLite consensus disorder prediction 51 81 - -
Apr6g1062 804 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 13 804 IPR045278 GO:0000375|GO:0003729
Apr6g1062 804 SUPERFAMILY YhbY-like 401 492 IPR035920 -
Apr6g1062 804 Pfam CRS1 / YhbY (CRM) domain 401 485 IPR001890 GO:0003723
Apr6g1062 804 Pfam CRS1 / YhbY (CRM) domain 613 688 IPR001890 GO:0003723
Apr6g1062 804 Pfam CRS1 / YhbY (CRM) domain 204 286 IPR001890 GO:0003723
Apr6g1062 804 SMART CRS1_YhbY_2 203 286 IPR001890 GO:0003723
Apr6g1062 804 SMART CRS1_YhbY_2 612 699 IPR001890 GO:0003723
Apr6g1062 804 SMART CRS1_YhbY_2 401 485 IPR001890 GO:0003723
Apr6g1062 804 Coils Coil 730 757 - -
Apr6g1062 804 SUPERFAMILY YhbY-like 611 709 IPR035920 -
Apr6g1062 804 SUPERFAMILY YhbY-like 202 292 IPR035920 -
Apr6g1062 804 ProSiteProfiles CRM domain profile. 399 496 IPR001890 GO:0003723
Apr6g1062 804 Coils Coil 494 514 - -
Apr6g1062 804 MobiDBLite consensus disorder prediction 319 344 - -
Apr6g1062 804 PANTHER CRS1 / YHBY (CRM) DOMAIN-CONTAINING PROTEIN 13 804 - -
Apr6g1062 804 Gene3D - 201 302 IPR035920 -
Apr6g1062 804 Gene3D - 611 712 IPR035920 -
Apr6g1062 804 Gene3D - 400 493 IPR035920 -
Apr6g1062 804 ProSiteProfiles CRM domain profile. 201 297 IPR001890 GO:0003723
Apr6g1062 804 MobiDBLite consensus disorder prediction 51 95 - -
Apr6g1062 804 MobiDBLite consensus disorder prediction 754 768 - -
Apr6g1062 804 MobiDBLite consensus disorder prediction 752 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1062 Apr-Chr6 15302243 15308420 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1062 - - gmx:100808013 1110.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1062 6 15302243 15308420 Apr6g1062 6 15302243 15308420 ECH
Apr2g1455 2 20608364 20613942 Apr6g1062 6 15302243 15308420 PCT