Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1052 ATGGCTATGGGACCCGAAAGATCGAAGCCACTACACAACTTCTCCTTACCCTGCTTGAAATGGGGCACCCAACGTGTACTCAGATGTGTCAACACCCACCACCCTTCTTCCCTCCATCGCCGATCCTCTCAATTCCAAACACCTCACAACGTCAAAAACGACAACAACGTTGATGTCGTTCCAGAAAACATCATCGGGGATCTCACAGTTGCTGCCAAGAAGCTCAAAGTTTCAATTTTTGAAGATGGGGTTGAAGAAACTACTGCTTCTGTTGCCGTCAATGTTATGCCTTGGAATTTGAGGACGCGAAGAGCTGCGTGCAAAGCTCCACCCCGTGAAGAAGAACGAAGGTTTTTTTATGTTGGGTGTTCTTCACCTTCTTCCCATTTGAAGGAGAAGAAGAAGGTGGTGGTTGTCAATGAGAGAGCCAAGTTTTGTGTTTCTCTTTCTAAGGAAGAGGTCGAACATGATTTCTGGGCTTTGCTTGGAACTAGGCCCCCCAGAAGGCCCAAAAAGAGGCCCAGGGTTGTGCAGAGGCAATTGGATACTATTTTTCCTGGCTTGTGGCTGTCTGAGATCACTGCAGAATCATACAAAGTGCCTGATGTTCCTGAATGA 618 0.4725 MAMGPERSKPLHNFSLPCLKWGTQRVLRCVNTHHPSSLHRRSSQFQTPHNVKNDNNVDVVPENIIGDLTVAAKKLKVSIFEDGVEETTASVAVNVMPWNLRTRRAACKAPPREEERRFFYVGCSSPSSHLKEKKKVVVVNERAKFCVSLSKEEVEHDFWALLGTRPPRRPKKRPRVVQRQLDTIFPGLWLSEITAESYKVPDVPE* 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1052 205 PANTHER PUTATIVE (DUF1639)-RELATED 2 202 - -
Apr6g1052 205 PANTHER OS01G0688600 PROTEIN 2 202 - -
Apr6g1052 205 Pfam Protein of unknown function (DUF1639) 149 198 IPR012438 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1052 Apr-Chr6 15218767 15220246 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1052 - - aprc:113868077 390.963
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1052 6 15218767 15220246 Apr2g1464 2 20685068 20686333 ECH
Apr6g1052 6 15218767 15220246 Apr6g1052 6 15218767 15220246 ECH