Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1039 ATGCTGGGGACTTCCCTGCAATTTGGTGGTGTTCGTGGTGAAGATCGGTTTTACATTCCGGTGAAGGCAAGGAAGAACCAGAATCAGCGAAAACAAGTTCATAGAGATAAGATTGGTGAAACTGAGAGTGCCGATTCTGTTTCAAAGAGCCAGCTTGTTGCATCTGAGAATGGGAATTCAAATGAATCTTCTTCATTCTCTTTGAACAAACCTTCTTCTTGTCTTGAGCCTGCTAGTAACATTGATAGGTTCCTCGAGTCCACAACACCTTTAGTTCCAGCTCAGTATTTCTCTAAGACAACAATGAGAGGTCTGAATTGGAAGACCTGTGATGTGGAGTATCAATCTTACTTTGCTCTTAATGATCTCTGGGAATCGTTTAAGGAGTGGAGTGCATATGGAGTAGGAGTCCCCTTGTTACTTGATCAAAGACAATCTGTTGTCCAATATTATGTTCCTTATTTGTCAGCTATTCAACTATATGGTCAATCAGCCAAGAAGTTTAATGCTAAGCCAAGGTTTAATGGTGAAGACAGTGATAGTGATTACTACAGAGATTCAAGTAGTGATGGAAGCAGTGATAGTGAATTTGGAAGAAGGACTGAGCTTTTTCTAGCCCAAAGAAATAGTCAAAATTGGACAGGCGATGCTTCTTTACATATGAGCAGGTTATCTGTACATGATAAACAAAATGCAATGCAAGAGGAATTTTCCAGCGATGATAGTGAAGCTGGGAATCCTCAAGATCTTCTTTTTGAATACTTTGATCAAGATCCTCCTTATAGCCGTGAACCATTATCTGACAAAATACTTGATCTCGCACGCCACTGTCCAAGCCTCAAGTCATTGAGAAGTTGTGATTTATTGCCAGCTAGTTGGATGTCTGTGGCATGGTATCCTATATATCGAATACCCACTGGTCTAACATTAAAAGATTTAGATGCCTGTTTTCTTACATACCATTCTCTCCATACACCCTTGACAGGAAATGGAGGTACCCAGGCTCCTATTTTGGTTTCTCCAAATGACATGGATGGTGTACCAAAGATTTCCTTACCAACTTTTGCAATGGCTTCCTATAAACTAAAGGGATCTGTTTGGATGCAAAATGCAGTTAGTGAGAGTCAACTTGCAAATTCCTTATTGCAGGCTGCAGATAATTGGTTAAGGTTGCTTCAGGTCAATCACCCTGATTATCAGTTCTTCATATCACATGGCACATACCACAGGTGA 1233 0.4039 MLGTSLQFGGVRGEDRFYIPVKARKNQNQRKQVHRDKIGETESADSVSKSQLVASENGNSNESSSFSLNKPSSCLEPASNIDRFLESTTPLVPAQYFSKTTMRGLNWKTCDVEYQSYFALNDLWESFKEWSAYGVGVPLLLDQRQSVVQYYVPYLSAIQLYGQSAKKFNAKPRFNGEDSDSDYYRDSSSDGSSDSEFGRRTELFLAQRNSQNWTGDASLHMSRLSVHDKQNAMQEEFSSDDSEAGNPQDLLFEYFDQDPPYSREPLSDKILDLARHCPSLKSLRSCDLLPASWMSVAWYPIYRIPTGLTLKDLDACFLTYHSLHTPLTGNGGTQAPILVSPNDMDGVPKISLPTFAMASYKLKGSVWMQNAVSESQLANSLLQAADNWLRLLQVNHPDYQFFISHGTYHR* 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1039 410 MobiDBLite consensus disorder prediction 171 196 - -
Apr6g1039 410 PANTHER DUF789 FAMILY PROTEIN 1 410 - -
Apr6g1039 410 PANTHER T15D22.8 1 410 - -
Apr6g1039 410 MobiDBLite consensus disorder prediction 44 72 - -
Apr6g1039 410 Pfam Protein of unknown function (DUF789) 79 402 IPR008507 -
Apr6g1039 410 MobiDBLite consensus disorder prediction 23 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1039 Apr-Chr6 15102485 15106824 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1039 - - gmx:100775751 652.899
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1039 6 15102485 15106824 Apr2g1759 2 23235896 23243372 ECH
Apr6g1039 6 15102485 15106824 Apr6g1039 6 15102485 15106824 ECH