Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1038 ATGACTGTGAAAACACCTGGAACACCAGCTTCAAAGATAGATAGGACACCAGTATCAACCCCAGGAGGGGCAAGGACTAGGGAAGAGAAGATTGTGGTAACAGTAAGGCTCAGGCCTTTAAACAGAAGGGAACAATTGGCTAAAGATCAGGTGGCATGGGACTGCATCAATGATTATACTATTGTGTATAAACCACTAGCAGCACATGAACGTTCTGCTCAACCAGCATCATTTACTTTTGATAAAGTTTTTGGTCCTGCTTGTGTAACAGAGACAGTATATGAAGAAGGAGTGAAGAAGGTCGCATTATCTGCTCTAACGGGCATTAATGCTACAGTTTTTGCTTATGGACAAACTAGCAGTGGAAAGACATACACAATGAGGGGAATAACAGAGAAGGCTGTCAATGATATCTATGAGCATATTATCAACACCCCTGAAAGAGATTTCACTATAAAAATATCTGGACTAGAGATATACAATGAGAATGTAAGGGACTTGTTAAATTCAGAATCTGGTCGCAGTTTGAAGCTTCTAGATGATCCTGAGAAAGGTACTGTGGTTGAGAAATTAGTGGAAGAAACAGCAAAAGATGACAAGCATTTGAGACATTTGATCTCCATTTGTGAAGCTCAAAGGCAAGTTGGTGAAACTGCTCTAAATGATAATAGCTCGCGGTCTCACCAGATAATTAGATTGACAATTCAAAGTACACTTCGTGAAGATGCAGAGTGTGTGAAATCTTTCGTTGCAACCCTGAATTTTGTTGATCTAGCTGGAAGTGAGAGAGCTGCACAGACACATGCAGATGGCACTAGGCTCAAAGAGGGCTGCCACATTAACCTTAGCTTGATGACTCTTACGACTGTTATCAGGAAGCTCAGTGTTGGAAAAAGAAGTGGTCATATACCTTACAGAGATTCAAAGCTCACACGTATATTGCAACACTCCCTCGGTGGGAATGCACGCACTGCTATCATATGTACTTTGAGTCCAGCACTGAGCCATGTAGAGCAATCGCGAAACACTCTCTTGTTTGCTACCCGGGCTAAGGAAGTAACAAATAATGCTCAAGTTAACATGGTTGTATCAGACAGGCAGCTTGTAAAACATTTACAAAAGGAAGTAGCCAGGCTGGAGGCAGAGTTACGCACTCCTGATCCATCTAAAGAAAAGGATTGGAAAATTCAACAGATGGAAATGGAAATTGAAGAGCTGAAACGCCAGAGAGACCAAGCACAAACACAGGTGGATGAACTACGCAAAAAGCTTCAGGATGATCAGAAGGTCTCAAATCCACTTGAATCACCACATCTGCCAGTCAAGAAGTGCCTGTCATTCACCGGTGCACTATCATCGCTAAAATCAGAGCTAGGATGTGAGCGAGTAAGAAACTCAACATTAAGACAGTCTATGAGGCAATCGTCCACTGCTCCTTTTACCCTTATGCATGAAATTCGCAAACTTGAGCATCTCCAAGAGCAGCTGGGTGAAGAAGCCAATCGTGCTTTGGAAGTATTGCAAAAGGAAGTGGCATGTCATAGACTTGGGAACCAAGATGCAGCTGAGACAATTGCAAAGCTGCAAGCAGAGATAAGGGAAATGCGTGCTGTTAGGTCCGCACCCAAGGAAGTTGAAGTTGGAAGCATGGTTTCTGTCAACAAAAGTGTGAGTGCTAATCTCAAGGAAGAGATTACCCGTCTTCATTCACAAGGCAGCACCATTGCAAATCTTGAACAGCAACTCGAAAATGTTCAAAGGTCCATAGACAAGTTGGTGATGTCTCTCCCCAACAATTTTCAACATTTAACCAGTGAAGCATCACCTAAGCAGAAAAAGGAACACAAAAGGAAAAAGTTGCTTCCGTTGTCTTCAAGTAATGCTGTGAATCGCCAAAACTTCATAAGATCTCCCTGCTCACCTTTATCTACTACACAACAAGTTTTGGAATCTGATATTGATATTGAAAATAAAGCCCCTGAGAATGATGATATTGTTTCAATTGAGACTCTGCCAGAGTCTGAGAAGGAGACTCCATCAAAGAGTGAAGAGGATGTTTCATCCAAGGAAAATAATTCAGGCTACCGGCGCTCTAGTTCAGTTAACATGAAGAAAATGCAGAAAATGTTTCAGAATGCAGCAGAGGAGAATGTAAGAAGTATAAGAGCATATGTCACAGAATTGAAAGAACGTGTGGCCAAACTGCAGTACCAAAAGCAGTTACTTGTTTGCCAGGTACTTGAACTTGAAGCAAATGAAGCAAATGGCCACAACATAGAAAACGAAGAGTACACATGTGAACCGGAGGAACCCCAGGTTTCATGGACAATAACATTCAAAGAGCAGCGACAGCAGATCCTTGAATTATGGGATGTATGTTTTGTCTCCATTATTCACAGGACACAGTTTTATTTGTTATTCAAAGGAGACCCAGCTGATCAAATATACATGGAAGTTGAACTAAGGCGTTTGACATGGTTGCAACATCACCTGGCAGAACTTGGGAATGCAAGCCCAGCTCCTCATGTTGGAGATGAACCTACTATCTCATTGTCATCAAGTATCAGAGCTTTGAAACGAGAAAGGGAATTTCTTGCTAAGAGATTGACATCACGTTTGAGCCCGGAGGAGAGGGAAGCATTATATATGAAATGGGATGTCCCTCTTGAAGGGAAGCAGAGGAGGATGCAGTTTATCAGCAAGCTTTGGACAGATCCTCATGACCAAAACCATGTACAGGAGAGTGCAGAAATAGTTGCAAAGCTTGTGGGTTTCCGTACAGGAGGCAACATGTCAAAGGAGATGTTTGAGCTGAATTTTGTTCTTCCATCTGACAAGAGGCCATGGTTAATGGGCTGGAATCCCATTACAAACCTTCTTAATTTGTAA 2889 0.4216 MTVKTPGTPASKIDRTPVSTPGGARTREEKIVVTVRLRPLNRREQLAKDQVAWDCINDYTIVYKPLAAHERSAQPASFTFDKVFGPACVTETVYEEGVKKVALSALTGINATVFAYGQTSSGKTYTMRGITEKAVNDIYEHIINTPERDFTIKISGLEIYNENVRDLLNSESGRSLKLLDDPEKGTVVEKLVEETAKDDKHLRHLISICEAQRQVGETALNDNSSRSHQIIRLTIQSTLREDAECVKSFVATLNFVDLAGSERAAQTHADGTRLKEGCHINLSLMTLTTVIRKLSVGKRSGHIPYRDSKLTRILQHSLGGNARTAIICTLSPALSHVEQSRNTLLFATRAKEVTNNAQVNMVVSDRQLVKHLQKEVARLEAELRTPDPSKEKDWKIQQMEMEIEELKRQRDQAQTQVDELRKKLQDDQKVSNPLESPHLPVKKCLSFTGALSSLKSELGCERVRNSTLRQSMRQSSTAPFTLMHEIRKLEHLQEQLGEEANRALEVLQKEVACHRLGNQDAAETIAKLQAEIREMRAVRSAPKEVEVGSMVSVNKSVSANLKEEITRLHSQGSTIANLEQQLENVQRSIDKLVMSLPNNFQHLTSEASPKQKKEHKRKKLLPLSSSNAVNRQNFIRSPCSPLSTTQQVLESDIDIENKAPENDDIVSIETLPESEKETPSKSEEDVSSKENNSGYRRSSSVNMKKMQKMFQNAAEENVRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEANGHNIENEEYTCEPEEPQVSWTITFKEQRQQILELWDVCFVSIIHRTQFYLLFKGDPADQIYMEVELRRLTWLQHHLAELGNASPAPHVGDEPTISLSSSIRALKREREFLAKRLTSRLSPEEREALYMKWDVPLEGKQRRMQFISKLWTDPHDQNHVQESAEIVAKLVGFRTGGNMSKEMFELNFVLPSDKRPWLMGWNPITNLLNL* 963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1038 962 Coils Coil 389 430 - -
Apr6g1038 962 MobiDBLite consensus disorder prediction 602 627 - -
Apr6g1038 962 MobiDBLite consensus disorder prediction 1 15 - -
Apr6g1038 962 Pfam Domain of unknown function (DUF3490) 779 942 IPR021881 -
Apr6g1038 962 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 30 387 IPR027417 -
Apr6g1038 962 CDD KISc_CENP_E 30 353 - -
Apr6g1038 962 ProSitePatterns Kinesin motor domain signature. 251 262 IPR019821 GO:0003777|GO:0005524|GO:0007018
Apr6g1038 962 ProSiteProfiles Kinesin motor domain profile. 30 353 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 Coils Coil 362 382 - -
Apr6g1038 962 Coils Coil 568 595 - -
Apr6g1038 962 Coils Coil 489 509 - -
Apr6g1038 962 Coils Coil 518 538 - -
Apr6g1038 962 Gene3D Kinesin motor domain 22 383 IPR036961 -
Apr6g1038 962 PRINTS Kinesin heavy chain signature 108 129 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 PRINTS Kinesin heavy chain signature 218 235 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 PRINTS Kinesin heavy chain signature 252 270 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 PRINTS Kinesin heavy chain signature 303 324 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 Pfam Kinesin motor domain 36 353 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 MobiDBLite consensus disorder prediction 1 27 - -
Apr6g1038 962 MobiDBLite consensus disorder prediction 655 701 - -
Apr6g1038 962 PANTHER KINESIN-LIKE PROTEIN KIN-7A 15 961 - -
Apr6g1038 962 MobiDBLite consensus disorder prediction 655 691 - -
Apr6g1038 962 SMART kinesin_4 28 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Apr6g1038 962 PANTHER CENTROMERE PROTEIN E 15 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1038 Apr-Chr6 15095498 15099926 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1038 28 383 Miscellaneous Gene Families AT5G06670 42.424 1.17e-80 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1038 K11498 - gmx:100775206 1738.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1038 6 15095498 15099926 Apr6g1038 6 15095498 15099926 ECH