Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g1005 ATGGCTCTCTATCAATGCCTCTTTTCCTTGTGGTTTGTGGGGGTTTCAGTTATCCAGTGTGTCGCGGGTGCAGATGATAAAGCAGTGCCCGAAACGGTGAGTTTTGACACGGGGGGTTTGAGCAGAGAAGCCTTCCCCAAAGGATTCATTTTCGGAACGGCCACCTCTGCTTATCAGGTAGAGGGTATGGCCCATAAAGACGGTCGAGGCCCAAGCATTTGGGACGTTTTCATCCAAAAGCCCGGGATTGTCGCAGATAATGGCACGGGTGAAGTTTCTGTGGATCAATACCATCGCTATAAAGAAGATATAGATCTCATGGCTAAGCTGAATTTTGATGCCTACCGGTTCTCAATTTCGTGGTCCAGAATTTTCCCAAATGGAACTGGCAAAGTAAACTGGAAAGGTGTAGCATACTACAATAGGTTGATCAACTACTTACTAGAAAGAGGGATCACTCCATATGCTAATCTCTACCATTATGACCTTCCTTTAGCTCTTGAGGAGAGATACAATGGATTATTGAGCCGCCAAGTTGTGAAAGATTTTGCGGATTATGCAGAATTCTGTTTCAAGACTTTTGGAGACAGAGTGAAGAATTGGATGACATTTAATGAACCTAGAGTGGTGGCTGCTCTTGGCTATGATAATGGTTTCTTTGCCCCTGGAAGATGCTCAAAAGAATATGGGAATTGTTCAGCCGGCAACTCAGGCACTGAGCCTTACATTGTTGCTCACAATTTGATATTGTCACATGCAGCTGCTGTTCAAAGATACAGAGAGAAGTACCAAGAAAAGCAAAAGGGAAGGATTGGAATTCTCTTGGACTTTGTTTGGTATGAGCCTCTTACAAGATCAAAGGCTGATAATTATGCAGCTCAAAGAGCTAGAGACTTTCATGTTGGATGGTTCATTCACCCCCTTGTATATGGAGAGTATCCAAGGACTATTCAAGGAATTGTTGGGAGTAGACTCCCCAAATTCACTGACGAAGAAGTTAAAATAGTGAAGGGCTCCATTGATTTTGTTGGAATCAACCAATATACTACTTACTACATGTATGATCCCCATCAATCAAAACCTAAAGTCCCAGGCTACCAACAGGACTGGAATGCTGGATTTGCTTATGCAAAGAATGGAGTACCTATTGGTCCAAGAGCTAATTCATATTGGCTTTACAATGTACCATGGGGCATGTACAAGGCATTGATGTACATAAAGGAGCACTATGGAAACCCAACTGTGATCTTATCTGAAAATGGCATGGATGATCCGGGTAATGTGACTCTTCCTAAAGGTTTGCATGACACCACAAGAATAAACTATTATAAAGGCTATTTGACTCAACTAAAAAAAGCAGTTGATGATGGAGCAAATGTGGTAGGATACTTTGCATGGTCATTGCTTGATAACTTTGAATGGAGGTTGGGGTACACATCAAGGTTTGGAATTGTTTATGTTGATTTTAAAACACTCAAGAGATATCCCAAGATGTCAGCATATTGGTTCAAGCAGCTCGTGAAAAGAAATTCAAAATAG 1539 0.4178 MALYQCLFSLWFVGVSVIQCVAGADDKAVPETVSFDTGGLSREAFPKGFIFGTATSAYQVEGMAHKDGRGPSIWDVFIQKPGIVADNGTGEVSVDQYHRYKEDIDLMAKLNFDAYRFSISWSRIFPNGTGKVNWKGVAYYNRLINYLLERGITPYANLYHYDLPLALEERYNGLLSRQVVKDFADYAEFCFKTFGDRVKNWMTFNEPRVVAALGYDNGFFAPGRCSKEYGNCSAGNSGTEPYIVAHNLILSHAAAVQRYREKYQEKQKGRIGILLDFVWYEPLTRSKADNYAAQRARDFHVGWFIHPLVYGEYPRTIQGIVGSRLPKFTDEEVKIVKGSIDFVGINQYTTYYMYDPHQSKPKVPGYQQDWNAGFAYAKNGVPIGPRANSYWLYNVPWGMYKALMYIKEHYGNPTVILSENGMDDPGNVTLPKGLHDTTRINYYKGYLTQLKKAVDDGANVVGYFAWSLLDNFEWRLGYTSRFGIVYVDFKTLKRYPKMSAYWFKQLVKRNSK* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g1005 512 Pfam Glycosyl hydrolase family 1 42 511 IPR001360 GO:0004553|GO:0005975
Apr6g1005 512 PANTHER GLYCOSYL HYDROLASE 18 509 IPR001360 GO:0004553|GO:0005975
Apr6g1005 512 Gene3D Glycosidases 28 512 - -
Apr6g1005 512 PANTHER BETA-GLUCOSIDASE 44 18 509 - -
Apr6g1005 512 SUPERFAMILY (Trans)glycosidases 39 508 IPR017853 -
Apr6g1005 512 PRINTS Glycosyl hydrolase family 1 signature 339 353 IPR001360 GO:0004553|GO:0005975
Apr6g1005 512 PRINTS Glycosyl hydrolase family 1 signature 415 423 IPR001360 GO:0004553|GO:0005975
Apr6g1005 512 PRINTS Glycosyl hydrolase family 1 signature 436 447 IPR001360 GO:0004553|GO:0005975
Apr6g1005 512 PRINTS Glycosyl hydrolase family 1 signature 457 474 IPR001360 GO:0004553|GO:0005975
Apr6g1005 512 PRINTS Glycosyl hydrolase family 1 signature 481 493 IPR001360 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g1005 Apr-Chr6 14743429 14747618 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g1005 31 512 Glycoside Hydrolase AT3G18080 81.573 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g1005 K05350 - gmx:100814740 989.949
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g1005 6 14743429 14747618 Apr6g1005 6 14743429 14747618 ECH