Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0996 ATGAGAAGAGTACCCTCCATTCTCTTCAGATCCCTCGCCGCCACGCGCGGTGTTTCTGCCGCCTCATTCGCCGTCCGTAACCGTTTTATTCAGACCGGTCTATATTGCAGCTCCACCGGCGGCGCCCACGCTCACCGGCGCCGTTTCTCTTCCCTTCTCGGCCCCTTCGCCGCCGCGTCTCTCGGCATCGCTGGAGCTCTGATCTCTCAGGAAGTCCTCGCCAAGGAGCCTCCGCCGCCCGAAGTTCTCCCGCGCGACGTCGTTCTCTACCAGTACGAGGCTTGTCCTTTCTGCAACAAAGTGAAAGCGTTTTTGGACTACTACGATATACCTTACAAAGTCGTGGAGGTCAACCCACTCAGTAAGAAAGAAATTAAATGGTCTGAGTATCAGAAGGTGCCAATATTGATGGTAGATGGCGAGCAGCTAAATGATTCATCAGTTATAATTGACAAGCTAAGACATAAGATTCTGTCAAAGGAAAAAGAAGATTCAATCTCTGAAGATGATGAAGAAACAAAATGGCGGCGGTGGGTTGATAATCATTTGGTGCATGTTCTGTCACCTAACATATATCGAAATACATCTGAAGCACTTGAGTCTTTTGAGTATATTACGAGCAATGGCAATTTCAGCTTTATGGAAAAAATTTCAGTGAAGTATGCTGGAGCTGCAGCTATGTATTTTGTGTCTAAGAATCTGAAGAAGAAATATAACATCACTGATGAACGTGCTGCTCTTTATGAGGCAGCAGAAACATGGGTAGATGCTCTGAATGGCCGGGAGTTCCTAGGAGGGTCTAGGCCCAACTTAGCCGACCTGGCCGTCTTTGGGGTTTTAAGACCCATACGCTATTTGAGGTCTGGCAAAGATATGGTGGAGCACACACGAATTGGTGAGTGGTACACAAGAATGGAGAGTGTTGTGGGAGAGCCTTCCAGGATTAAAGCCTAA 954 0.479 MRRVPSILFRSLAATRGVSAASFAVRNRFIQTGLYCSSTGGAHAHRRRFSSLLGPFAAASLGIAGALISQEVLAKEPPPPEVLPRDVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPLSKKEIKWSEYQKVPILMVDGEQLNDSSVIIDKLRHKILSKEKEDSISEDDEETKWRRWVDNHLVHVLSPNIYRNTSEALESFEYITSNGNFSFMEKISVKYAGAAAMYFVSKNLKKKYNITDERAALYEAAETWVDALNGREFLGGSRPNLADLAVFGVLRPIRYLRSGKDMVEHTRIGEWYTRMESVVGEPSRIKA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0996 317 Gene3D Glutaredoxin 83 160 - -
Apr6g0996 317 PANTHER PROSTAGLANDIN E SYNTHASE 2-RELATED 15 317 - -
Apr6g0996 317 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 85 161 IPR004045 -
Apr6g0996 317 Gene3D - 165 315 - -
Apr6g0996 317 CDD GST_C_mPGES2 168 311 IPR034335 -
Apr6g0996 317 CDD GST_N_mPGES2 86 157 - -
Apr6g0996 317 SUPERFAMILY Thioredoxin-like 86 157 IPR036249 -
Apr6g0996 317 Pfam Glutathione S-transferase, N-terminal domain 89 155 IPR004045 -
Apr6g0996 317 ProSitePatterns Glutaredoxin active site. 89 105 IPR011767 -
Apr6g0996 317 SFLD Prostaglandin E synthase like 68 316 - -
Apr6g0996 317 SUPERFAMILY GST C-terminal domain-like 167 309 IPR036282 -
Apr6g0996 317 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 15 317 - -
Apr6g0996 317 SFLD Prostaglandin E synthase like.1 68 316 IPR034334 GO:0050220
Apr6g0996 317 ProSiteProfiles Glutaredoxin domain profile. 75 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0996 Apr-Chr6 14603197 14608895 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0996 K05309 - gmx:100811576 549.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0996 6 14603197 14608895 Apr6g0996 6 14603197 14608895 ECH