Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0994 ATGATCACTTTAATAGACTTCTACCATGTGATGACTGCAATGGTGCCACTCTATGTGGCTATGATATTAGCCTATGGTTCTGTGAAGTGGTGGAAGATTTTCTCCCCTGATCAATGCTCTGGCATAAACCGTTTTGTTGCACTCTTTGCAGTGCCTCTTCTTTCTTTCCATTTCATAGCCTCAAACAACCCTTACCAAATGAACCTTAGGTTCCTAGCTGCTGACACTCTCCAAAAGATCATAATTTTAGTCCTTCTTACACTGTGGAGCAATTTGACCAAGAAGGGTTGTTTGGAATGGACCATAACACTGTTCTCTCTTTCCACGCTTCCAAACACCTTGGTCATGGGCATCCCTTTGCTCAAAGGAATGTATGGTGAGTTCTCAGGGAGCCTCATGGTGCAAATTGTGGTACTTCAGTGCATCATTTGGTACACTTTGATGCTGTTTATGTTTGAGTTTAGGGGTGCTAGAATGTTAATCTCTGAGCAGTTTCCTGACACTGCTGCTTCCATTGTCTCAATCCATGTTGACTCTGATGTCATGTCATTGGATGGAAGACAACCTTTGGAAACTGAAGCTGAGATCAAAGAAGATGGTAAACTTCATGTCACTGTTAGAAAGTCCAATGCTTCAAGATCAGACATATTCTCAAGAAGGTCTCAGGGTCTTTCTTCAACCACTCCACGGCCTTCTAACCTCACCAATGCAGAGATTTACTCTCTGCAATCCTCTAGGAACCCCACACCAAGAGGCTCTAGCTTCAACCACACTGATTTCTACTCAATGATGGCTGGTGGTGGTGCCCGCAACTCCAACTTTGGTGCTTCTGATGTTTATGGCCTTTCAGCTTCAAGAGGGCCAACTCCAAGGCCTTCTAACTATGATGAAGATGGTGGTAAGCCAAAGTTTCATTACCATGCTGGTGGAACTGGCCACTACCCGGCACCAAACCCTGGCATGTTCTCTCCCTCTGCAGGGTCTAAAAGTGTTGCTAATGCTAATAATGCTAATGCCAAGAGGCCTAATGGCCAGGCTCAGCAGAAAGCTGAGGATGGGAATAGGGACCTTCATATGTTTGTTTGGAGTTCAAGTGCTTCACCAGTTTCTGATGTGTTTGGTGGCCATGAATATGGTGCCCATGATCAGAAAGAAGTCAAATTGACTGTATCTCCAGGAAAAGAGGACTACCTAGAGAAAGATGAGTTCAGCTTTGGGAATAGAGGAATGGAAAGGGAAATGAATCAGCATGAAGGTGAGAAAGTTGGAGATGGCAAGCCTAAAAACATGCCTCCAGCAAGTGTGATGACAAGGCTTATATTGATCATGGTGTGGAGAAAACTCATCAGAAACCCCAACACTTACTCTAGCCTAATTGGCCTCACTTGGTCTCTTGTTTCATTCAAGTGGAATGTTGAAATGCCTGCCATAATCGCAAAGTCTATTTCCATATTGTCAGATGCTGGACTTGGCATGGCCATGTTCAGTCTTGGTCTGTTCATGGCTTTGCAACCAAGGATCATAGCATGTGGAAATTCCATAGCAGCTTTTGCCATGGCTGTGAGATTCCTTACAGGTCCAGCTGTCATGGCAGCTGCTTCCATTGCTGTTGGACTCAAAGGTGTTCTCCTACACGTTGCCGTTGTTCAGGCAGCTCTTCCCCAAGGAATTGTCCCATTTGTCTTTGCAAAGGAATATAATGTACATCCTGATATTCTCAGCACAGCTGTTATTTTTGGGATGTTGATTGCATTGCCCATAACTCTAGTGTACTACATCTTGATGGGGTTGTGA 1794 0.4443 MITLIDFYHVMTAMVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFIASNNPYQMNLRFLAADTLQKIIILVLLTLWSNLTKKGCLEWTITLFSLSTLPNTLVMGIPLLKGMYGEFSGSLMVQIVVLQCIIWYTLMLFMFEFRGARMLISEQFPDTAASIVSIHVDSDVMSLDGRQPLETEAEIKEDGKLHVTVRKSNASRSDIFSRRSQGLSSTTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHTDFYSMMAGGGARNSNFGASDVYGLSASRGPTPRPSNYDEDGGKPKFHYHAGGTGHYPAPNPGMFSPSAGSKSVANANNANAKRPNGQAQQKAEDGNRDLHMFVWSSSASPVSDVFGGHEYGAHDQKEVKLTVSPGKEDYLEKDEFSFGNRGMEREMNQHEGEKVGDGKPKNMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLTWSLVSFKWNVEMPAIIAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIAAFAMAVRFLTGPAVMAAASIAVGLKGVLLHVAVVQAALPQGIVPFVFAKEYNVHPDILSTAVIFGMLIALPITLVYYILMGL* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0994 597 MobiDBLite consensus disorder prediction 323 350 - -
Apr6g0994 597 MobiDBLite consensus disorder prediction 213 235 - -
Apr6g0994 597 TIGRFAM 2a69: auxin efflux carrier 1 597 IPR014024 -
Apr6g0994 597 Pfam Membrane transport protein 9 592 IPR004776 GO:0016021|GO:0055085
Apr6g0994 597 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1A 1 597 - -
Apr6g0994 597 MobiDBLite consensus disorder prediction 282 352 - -
Apr6g0994 597 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 597 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0994 Apr-Chr6 14570450 14574438 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0994 1 588 Organic Solute Cotransporters AT1G73590 74.437 0.0 879
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0994 K13947 - gmx:100499637 1113.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0994 6 14570450 14574438 Apr6g0994 6 14570450 14574438 ECH
Apr2g1585 2 21633784 21638596 Apr6g0994 6 14570450 14574438 PCT