Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0993 ATGGCGCTGTTCCTTCTCTACGAGTCAGCTTCGGGTTACGCTCTCTTCGAAGCTCACGGCCTCGACGAAATCGGTCAGAACACGGAGGCGGTTCGGAACTCGGTTTGGGATTTGAACAGGTTCGGCAAAGTCGTCAAGCTTCGCTCCTTCAACCCTTTCACCTCCGCACTCGACGCCCTCAAACAGTGCAACGCCGTTTCCGAAGGCTTGTTGACTGATGAATTGAGAACGGTTTTGGAAACTAACTTACCGAAAGTGAAGGAAGGTAAGAAATCGAAGTTCAGTTTAGGTGTATCAGATCCTAAGATTGGTTCTCAGATTTTTGAAATCACTAAAATTCCTTGCCAAAGTAACGAGTTTGTGAGTGAGTTGCTTCGCGGTGTGCGCCTCCATTTTGATAGGTTTGTCAGTGATCTCAAGTCTGGGGATTTGGAAAAGGCTCAGCTTGGTCTGGGGCATAGTTACAGCAGAGCGAAGGTGAAGTTCAATGTTAATCGAGTTGACAATATGGTCATTCAAGCGATTTTCCTTCTTGATACACTTGATAAGGATATCAATTCCTTCTCCATGAGAGTCAGAGAATGGTATTCTTGGCATTTTCCGGAACTGGTGAAGATTGTAAATGATAATTATCTGTATGCCAAAGTTGCAAAATTTATTGAGGATAAATCAAAGGTGTCTGAAGACAAGATTTCAACCTTAACTGACATAGTTGGTGATGAAGATAAAGCAAAGGAGATTGTGGAAGCTGCCAAGGCCTCCATGGGACAGGATTTGTCCCCAGTGGACTTGATTAATGTCAAACAATTTGCACAGAGGGTGATGGACCTGTCTGAGTACAGGCGGAAGCTGTATGATTACCTGGTTGCTAAAATGAACGACATAGCACCAAATTTGGCCTCCTTAATTGGTGAAGTTGTTGGAGCGCGATTAATTTCTCATGCAGGTAGCCTCACAAATTTAGCTAAATGCCCCTCTTCAACTCTTCAAATTCTTGGTGCAGAGAAGGCTCTGTTCAGGGCATTAAAAACAAGAGGAAACACTCCCAAATATGGTCTGATATTCCACTCTTCTTTTATTGGTCGAGCATCTGCCAGAAATAAGGGCCGAATAGCTCGCTATCTTGCTAATAAATGTTCAATTGCATCACGGATTGACTGCTTTTCTGAAAGGGGCACTACTGCTTTTGGGGAGAAACTACGTGAGCAAGTTGAGGAGCGACTTGACTTCTATGACAAGGGAGTTGCCCCTCGTAAGAACATAGATGTCATGAAGTCTGCTATTGAAAGTGTTGAAAACAAAGATACAGTGATGGAAACAGAAGAAGTGCCTGTTGAAGTTTCAGGCAAGAAAGCCAAGAAGAAGCGTAAGTCTGCCACTACAGACAATGATAACATGGCTGTAGATAAGCCCGCAGAGACTACAAACGGTGATGCATTGGAGGATCATAAGTCTGAAAAGAAGAAGAAAAAGAAAGAAAAGAGGAAATTGGACCATGAGGTGGAGATTCATGATCAAGCCATTGATGATGGTGCTAATGGGGCTGCTACTGAGACTAAGAAAAAGAAAAAGAAATCAAAAAGTAAAGATGTTGAGTAA 1599 0.4309 MALFLLYESASGYALFEAHGLDEIGQNTEAVRNSVWDLNRFGKVVKLRSFNPFTSALDALKQCNAVSEGLLTDELRTVLETNLPKVKEGKKSKFSLGVSDPKIGSQIFEITKIPCQSNEFVSELLRGVRLHFDRFVSDLKSGDLEKAQLGLGHSYSRAKVKFNVNRVDNMVIQAIFLLDTLDKDINSFSMRVREWYSWHFPELVKIVNDNYLYAKVAKFIEDKSKVSEDKISTLTDIVGDEDKAKEIVEAAKASMGQDLSPVDLINVKQFAQRVMDLSEYRRKLYDYLVAKMNDIAPNLASLIGEVVGARLISHAGSLTNLAKCPSSTLQILGAEKALFRALKTRGNTPKYGLIFHSSFIGRASARNKGRIARYLANKCSIASRIDCFSERGTTAFGEKLREQVEERLDFYDKGVAPRKNIDVMKSAIESVENKDTVMETEEVPVEVSGKKAKKKRKSATTDNDNMAVDKPAETTNGDALEDHKSEKKKKKKEKRKLDHEVEIHDQAIDDGANGAATETKKKKKKSKSKDVE* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0993 532 ProSiteProfiles Nop domain profile. 295 413 IPR002687 -
Apr6g0993 532 Coils Coil 480 500 - -
Apr6g0993 532 Gene3D - 140 298 - -
Apr6g0993 532 MobiDBLite consensus disorder prediction 515 532 - -
Apr6g0993 532 PANTHER NUCLEOLAR PROTEIN 5 NUCLEOLAR PROTEIN NOP5 NOP58 1 529 IPR045056 GO:0030515|GO:0031428|GO:0032040
Apr6g0993 532 Pfam snoRNA binding domain, fibrillarin 177 409 IPR002687 -
Apr6g0993 532 PANTHER BNACNNG34340D PROTEIN 1 529 - -
Apr6g0993 532 MobiDBLite consensus disorder prediction 437 532 - -
Apr6g0993 532 Pfam NOP5NT (NUC127) domain 4 69 IPR012974 -
Apr6g0993 532 SMART NOSIC_2 170 222 IPR012976 -
Apr6g0993 532 Gene3D Nop domain 299 422 IPR042239 -
Apr6g0993 532 SUPERFAMILY Nop domain 163 412 IPR036070 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0993 Apr-Chr6 14533742 14537488 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0993 K14564 - gmx:100779446 914.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0993 6 14533742 14537488 Apr6g0993 6 14533742 14537488 ECH