Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0990 ATGGCAGATCAGAGTCCGAAAGCAGAGACCTTTGAACTCAATAATGGCAGCATGCAAGTGCTCCTCACCAATCTCGGCTGCACCATCATCTCCTTATCGGTTCCAGGAAAAGATGGTGTCTTATCCGATGTCGTTCTTGGCCTCGACAATGTTGAGTCCTATCAGAAAGGTCTTGCTCCTTATTTTGGCTGCATTGTGGGTCGGGTTGCAAACAGGATAAAGGATGGCAAGTTTACACTTGATGGCGTTCAGTACTCTTTGCCTCTTAACAAACCCCCAAACAGTCTCCATGGTGGAAATGTTGGGTTTGATAAGAAGGTATGGGAAGTAGTTGAACATAAAAAAGGTGAAACTCCATCAATTACTTTTAAGTATCACAGTCATGATGGAGAGGAAGGTTATCCTGGGGATATCACTGTTACTGCAACTTATACGCTCACCTCAAACACAACACTGAGGCTTGACATGGAAGGAGTGCCAAAGGACAAGCCCACCATTATTAACTTAGCTCAGCATACCTACTGGAACTTAGCCGGCCACAACTCGGGGAATATACTTGACCATTCAATTCAGATATGGGCTAATCACATCACTCCTGTGGATGAGAATACTGTGCCAACCGGTGAAATCATGCCAGTTAAGGATACCCCTTTTGATTTTACATCTGAGAAGAGAATAGGCAACACCATTAGTCAGGTTGGAATGGGATATGACCACAATTATGTGCTTGATTGTGGAGAAGAGAAGATGGGTTTGAGACATGCTGCAAAAGTGAGGGATCCATCCAGTTCAAGAGTACTAAACCTATGGACAAATACCCCTGGTATGCAATTTTACACAGCAAACTATGTTGATGGTGTTATTGGAAAAGGAGGTGCTCTGTATGGAAAATATGCTGGGTTATGTCTGGAGACACAGGGATTCCCTAATGCTGTAAACCAGCCAAATTTTCCATCTGTTGTAGTTCGACCTGGCGAGAAGTATCAACATTCCATGTTGTTTGAGTTTTCAGTTGAGTGA 1020 0.4353 MADQSPKAETFELNNGSMQVLLTNLGCTIISLSVPGKDGVLSDVVLGLDNVESYQKGLAPYFGCIVGRVANRIKDGKFTLDGVQYSLPLNKPPNSLHGGNVGFDKKVWEVVEHKKGETPSITFKYHSHDGEEGYPGDITVTATYTLTSNTTLRLDMEGVPKDKPTIINLAQHTYWNLAGHNSGNILDHSIQIWANHITPVDENTVPTGEIMPVKDTPFDFTSEKRIGNTISQVGMGYDHNYVLDCGEEKMGLRHAAKVRDPSSSRVLNLWTNTPGMQFYTANYVDGVIGKGGALYGKYAGLCLETQGFPNAVNQPNFPSVVVRPGEKYQHSMLFEFSVE* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0990 339 PANTHER ALDOSE-1-EPIMERASE 8 338 - -
Apr6g0990 339 PANTHER ALDOSE 1-EPIMERASE 8 338 - -
Apr6g0990 339 CDD galactose_mutarotase_like 14 336 - -
Apr6g0990 339 Pfam Aldose 1-epimerase 10 334 IPR008183 GO:0005975|GO:0016853
Apr6g0990 339 PIRSF GALM 1 339 IPR015443 GO:0016853|GO:0019318
Apr6g0990 339 Gene3D - 1 339 IPR014718 GO:0030246
Apr6g0990 339 SUPERFAMILY Galactose mutarotase-like 7 337 IPR011013 GO:0003824|GO:0005975|GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0990 Apr-Chr6 14511637 14514283 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0990 7 337 Miscellaneous Gene Families AT3G47800 51.662 9.68e-112 327
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0990 K01785 - gmx:100776238 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0990 6 14511637 14514283 Apr6g0990 6 14511637 14514283 ECH