Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0989 ATGGCGTCACGGAAAGTGGTTGGGTTCGTTGGATTGGATGAATTGGGGTTGGAGATGGCGTCGCTGGCTATTCGCCATGGCTACGGTGTTCAAGCTTTTGAGATAAATGATCCCATTATTCAAGAACTCATGAAGCTTGGAGGAGTTAGATGTTCAAGCCCTTCCGAAGCAGGGAGAGATGTAGCAGCCTTAGTTGTCCTAATATCTCACGCAGATCAAACTAATGATCTAATTTTTGGAGATGAGGGTGCTTTGAAAGATCTAAAACAAGACACAATTCTTATTCTCCGTTCAACCATATTACCATCAGTTCTATGTAAACTAGAGAAGGATCTGGCAGAAATTCATGAGATAACTTATGTTGTTGACGCATATGTCTCATATGGGAGGTCTGATGCTTTGAATGGAAAGCTCACTATTGCATCATCAGGAAAACCAAATGCCATTGCAAGAGCCCAGCCTATTCTTTCTGCAATGTGTGAAAAGCTCTTCAGTTTTGAGGGTGAAATTGGTGGTGGCAGTAAGGTTAAAATGGTTATTGTGATGCTGGAAGGCATTCATTTCATTAATTCAGTGGAGGCTCTCTGTCTTGGTGCCAAAGCTGGAATTCATCCATGGATAATCTATGATATAATTTCCAATGCTGCTGGAAATTCATGGGTGTTCAAGAATAATGTTCCTACTTTGTTGAAGGGGGAGGTTAAGCATCAAATTCTGAACACTTTTGTTAAGGAGTTGGAAATCATTCTGGATATGGCCAAGTCACTTACTTTTCCACTTCCACTTTTGGCTGCTACTCATCAGCAACTTATTCATGGTACAAAATTCAGGGTTTCACTTGTTGATAGTCGAGATGATATTACAACATTAATTGAGGTTTGGGAAATACTTTATGGGGTTAAAATTTCAGATGCTGCAAATGCTGATGCTTATAACGCAGAACAACTGGCATCTGTATTTACTACTGATTCTAAGAGTGGGAGACGGGTTGGTTTTATTGGACTTGGAGCTATGGGGTTTGGCATGGCAACTCATTTACTAAGTTCAAAATTCTGCGTTGTTGGTTATGATGTGTATAAACCAACTCTAACGCGATTTGTAAATGCTGGTGGCTTGATTGGAAATTCTCCAGCTGAAGTGAGCAAAGATGTTGATGTTCTCATAATCATGGTCACAAATGAAACTCAAGCAGAGAATGCTTTATATGGAGAATATGGTGCAGTTTCAGAGCTTCCACCAGGTGCATCTATCATTCTCTCTTCTACTGTTTCTCCTGCATATGTGAGTCAGCTGGAGCGCAGACTGCATAGTGAAGGTAAGAATTTGAAGTTGGTGGATGCCCCAGTTTCTGGTGGTGTTAAGAGGGCATCAATGGGAACGCTTACGATAATGGCTTCAGGAACTGATGATGCTCTGAAGAGTGCTGGTTTAGTCTTAGCAGCCTTGAGTGAGAAGCTTTATGTTATCAAAGGTGGTTGCGGTTCTGGAAGTGGTATAAAGATGGTTAACCAATTACTTGCTGGAGTTCAGATTGCCTCAGCTGCTGAGGCAATGGCGTTTGCAGCACGGTTGGGTTTGAATACAAGACTGTTGTTTGATTTTATTACAATTAGTGGAGGAACTTCCTGGGTCTTTGAAAATCGTGTCCCACACATGGTAGACAATGATTACACACCTTGTTCAGCACTTGATATCTTTGTGAAGGACTTGGGTATTGTAACTCGTGAATCATCATCATGGAAAGTTCCACTTCACCTATCAACTGTTGCACACCAACTGTATCTGGCAGGTTCTGCTGCTGGTTGGGGACGGATAGATGATGCAAGTGTTGTCAAGGTTTATGAGACACTAACTGGTGTCAGAGTTGAAGGAAAACTCCAGGTTCAAAGGAAAGATGTTGTGTTACATTCTCTTCCACCCGAGTGGCCCCAAGATCATGTTCTTGATATACAAAGACTAAAAGAAGGCAATTCAAAGATTTTGGTTGTTCTGGATGATGATCCGACAGGAACACAGACTGTTCAGGATATTGAGGTATTAATGGAATGGACCATTGAGTCGCTGATTGAGCAGTTCAGAAAAAGTCCCAAATGCTTTTTCATTTTGACAAACTCCAGGTCACTGAGTTCTGAGAAGGCCAGTGCTTTGATAAGAGAGATTTGCAGAAATCTAGATACTGCTGCAAAATCAGTTGACAACATTGATTATACAGTAGTGTTGAGGGGAGATTCAACTTTGCGTGGTCATTTTCCAGAGGAAGCAGATGCTGTTGTTTCAGTATTGGGTGAGATGGATGCATGGATAATTTGTCCCTTTTTCCTTCAAGGGGGCCGCTACACTATCAATGACATACACTATGTTGATGATTCTGATATGCTTGTTCCTGCAGGGGACACAGAGTTTTCCAAAGATGCTGCCTTTGGCTACAAATCTTCAAACCTACGAGATTGGGTAGAGGAGAAGACAAATGGTCGAATACTTTCAAGTAGTGTTGCGTCTGTTTCTATCCAACATTTGAGGAAAGGTGGTCCAGATGCAGTTTGTCAGCATCTAAGCAATTTGCCGAAGGGGTCAATATGCATAGTTAATGCAGCTAGTGAAAGAGACATGGCTATATTTGCACTTGGAATGATCAAGGCAGAATTGATGGGAAAACGTTTTTTGTGTCGTACTGCTGCTAGTTTTGTTTCTGCTTGTATTGGAATCATCTCAAAGCCTCCAATATTGCCAAATGATCTAGGAATGGATAGAGAAAGGAATGGTGGGCTGATAGTTGTGGGATCCTATGTTCCAAAAACAACAAAGCAGGTTGAAGAGCTTAAATTACAGTGTGGTCAGTTCTTACAAAGTATTGAGGTATCAGTTGAAAAACTTGCAATGAGTTCTATTGAGGAGAGGGAGGAGGAAATTGGTAGAACAGCTGAATTAGCAGATATATATCTTAAAGCTCATAAAGACACTCTTATAATGACCAGCCGAAATCTCATAACTGGAAAAACTGCTGCTGAGAGTTTGGACATTAACTTTAAAGTGAGTTCTGCTTTGGTGGAAATAGTGAAAAGAATAACTACAAAACCTCGCTATATAATTGCAAAGGGTGGTATCACGTCTTCAGACCTTGCTACAAAAGCCCTTGGGGCAAGATGTGCCAAGATAGTTGGACAAGCACTTGCCGGTATTCCCTTGTGGCAATTAGGCCCTGAAAGTAGACATCCTGGTGTTCCTTACATTGTCTTCCCAGGTAATGTTGGTGACAGCAGAGCATTGGCAGTAGTTGTGAAGTCCTGGACTCATCCAATCAGACTTACATCGACAAAAGAGATTCTTAAGAATGCAGAAAGGGGTGGATATGCTGTTGGAGCATTTAATGTCTATAATTTGGAAGGAGTTGAGGCTGTTGTTTCTGCTGCAGAGGAAGAACAAAGTCCTGCTATTTTACAGATCCATCCAAGTGCCTTGAAGCAAGGAGGAATTCCCTTGGTTGCTTGTTGCATTTCTGCTGCTGAGCAAGCCAGTGTTCCCATTACTGTTCACTTTGATCATGGAACTTCAAAGCAAGATCTTGTGGAAGCTCTTGAGCTGGGATTCAGTTCCGTGATGGTGGATGGCTCACACCTTTCTTTCAATGAAAATGCTGCATACACAAAATTTATATCGTTACTGGCTCACTCAAAAGATATGCTGGTTGAAGCTGAGCTAGGAAGATTGTCAGGGACAGAAGATGATTTGACTGTAGAAGAATATGAAGCCCGGCTAACAGATGTTAATATGGCACAAAAATTCATTGATGAGACTGGCATAGATGCCTTGGCAGTGTGTATTGGTAATGTGCACGGAAAGTACCCTGCAAGTGGTCCAAATCTCAGATTTGATTTGCTTAAGGAGCTGCATGCTTTGACCCTGAAGAAAGGAGTTTTTCTGGTTCTTCATGGTGCATCTGGATTGACTGAAGAACTTGTTAAGGAGTGCATAAATCTTGGCGTTAGAAAGTTCAATGTCAACACCGAAGTAAGGAAAGCATATATGGACTCCCTCATTACTCCCAAGAATGATCTAGTTCATGTTATGGCTTCTGCAAAGGACGCCATGAAAACTGTGGTTGCAGAAAAGATGCATCTCTTTGGTTCAGCAGGAAGGGCATGA 4143 0.4166 MASRKVVGFVGLDELGLEMASLAIRHGYGVQAFEINDPIIQELMKLGGVRCSSPSEAGRDVAALVVLISHADQTNDLIFGDEGALKDLKQDTILILRSTILPSVLCKLEKDLAEIHEITYVVDAYVSYGRSDALNGKLTIASSGKPNAIARAQPILSAMCEKLFSFEGEIGGGSKVKMVIVMLEGIHFINSVEALCLGAKAGIHPWIIYDIISNAAGNSWVFKNNVPTLLKGEVKHQILNTFVKELEIILDMAKSLTFPLPLLAATHQQLIHGTKFRVSLVDSRDDITTLIEVWEILYGVKISDAANADAYNAEQLASVFTTDSKSGRRVGFIGLGAMGFGMATHLLSSKFCVVGYDVYKPTLTRFVNAGGLIGNSPAEVSKDVDVLIIMVTNETQAENALYGEYGAVSELPPGASIILSSTVSPAYVSQLERRLHSEGKNLKLVDAPVSGGVKRASMGTLTIMASGTDDALKSAGLVLAALSEKLYVIKGGCGSGSGIKMVNQLLAGVQIASAAEAMAFAARLGLNTRLLFDFITISGGTSWVFENRVPHMVDNDYTPCSALDIFVKDLGIVTRESSSWKVPLHLSTVAHQLYLAGSAAGWGRIDDASVVKVYETLTGVRVEGKLQVQRKDVVLHSLPPEWPQDHVLDIQRLKEGNSKILVVLDDDPTGTQTVQDIEVLMEWTIESLIEQFRKSPKCFFILTNSRSLSSEKASALIREICRNLDTAAKSVDNIDYTVVLRGDSTLRGHFPEEADAVVSVLGEMDAWIICPFFLQGGRYTINDIHYVDDSDMLVPAGDTEFSKDAAFGYKSSNLRDWVEEKTNGRILSSSVASVSIQHLRKGGPDAVCQHLSNLPKGSICIVNAASERDMAIFALGMIKAELMGKRFLCRTAASFVSACIGIISKPPILPNDLGMDRERNGGLIVVGSYVPKTTKQVEELKLQCGQFLQSIEVSVEKLAMSSIEEREEEIGRTAELADIYLKAHKDTLIMTSRNLITGKTAAESLDINFKVSSALVEIVKRITTKPRYIIAKGGITSSDLATKALGARCAKIVGQALAGIPLWQLGPESRHPGVPYIVFPGNVGDSRALAVVVKSWTHPIRLTSTKEILKNAERGGYAVGAFNVYNLEGVEAVVSAAEEEQSPAILQIHPSALKQGGIPLVACCISAAEQASVPITVHFDHGTSKQDLVEALELGFSSVMVDGSHLSFNENAAYTKFISLLAHSKDMLVEAELGRLSGTEDDLTVEEYEARLTDVNMAQKFIDETGIDALAVCIGNVHGKYPASGPNLRFDLLKELHALTLKKGVFLVLHGASGLTEELVKECINLGVRKFNVNTEVRKAYMDSLITPKNDLVHVMASAKDAMKTVVAEKMHLFGSAGRA* 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0989 1380 Gene3D Aldolase class I 1096 1380 IPR013785 -
Apr6g0989 1380 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 169 296 IPR008927 -
Apr6g0989 1380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 329 486 IPR036291 -
Apr6g0989 1380 TIGRFAM cbbA: ketose-bisphosphate aldolase 1102 1380 IPR000771 GO:0005975|GO:0008270|GO:0016832
Apr6g0989 1380 PANTHER ALDOLASE-RELATED 285 1304 - -
Apr6g0989 1380 PANTHER ALDOLASE-RELATED 1 273 - -
Apr6g0989 1380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 163 IPR036291 -
Apr6g0989 1380 ProSitePatterns 3-hydroxyisobutyrate dehydrogenase signature. 332 345 IPR002204 GO:0016491
Apr6g0989 1380 Gene3D - 491 623 IPR013328 GO:0016491
Apr6g0989 1380 Pfam Nucleotide-binding C-terminal domain 923 1089 IPR031475 -
Apr6g0989 1380 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 171 270 IPR029154 GO:0051287
Apr6g0989 1380 Pfam NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 494 614 IPR029154 GO:0051287
Apr6g0989 1380 Pfam Fructose-bisphosphate aldolase class-II 1104 1379 IPR000771 GO:0005975|GO:0008270|GO:0016832
Apr6g0989 1380 Pfam Sugar-binding N-terminal domain 661 898 IPR010737 -
Apr6g0989 1380 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 329 487 IPR006115 GO:0050661
Apr6g0989 1380 Pfam NAD binding domain of 6-phosphogluconate dehydrogenase 7 164 IPR006115 GO:0050661
Apr6g0989 1380 Gene3D - 2 167 - -
Apr6g0989 1380 Gene3D - 323 490 - -
Apr6g0989 1380 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 493 621 IPR008927 -
Apr6g0989 1380 SUPERFAMILY YgbK-like 661 1093 - -
Apr6g0989 1380 CDD TBP_aldolase_IIB 1105 1378 IPR000771 GO:0005975|GO:0008270|GO:0016832
Apr6g0989 1380 Gene3D - 914 1095 IPR042213 -
Apr6g0989 1380 SUPERFAMILY Aldolase 1103 1380 - -
Apr6g0989 1380 Gene3D - 660 899 IPR037051 -
Apr6g0989 1380 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 285 1304 - -
Apr6g0989 1380 PANTHER KETOSE-BISPHOSPHATE ALDOLASE CLASS-II FAMILY PROTEIN 1 273 - -
Apr6g0989 1380 Gene3D - 171 296 IPR013328 GO:0016491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0989 - - gmx:100779987 2388.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0989 6 14482911 14510093 Apr6g0989 6 14482911 14510093 ECH