Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0909 ATGTCGCCGTCAAATGGGTTGCAGAACGGCGGCGGCGGCGGCGGCGGTAATGGGGTGAGTTATATCGAGCACCAGGTTTCAAAACTGGACACTCTTGCTGGTGTGGCAATCAAGTATGGCGTTGAGGTAGCGGACATCAAAAGGATGAATGGGTTAGCCACAGATCTTCAAATGTTTGCACTGAAGACGTTGAGAATTCCATTACCAGGACGACATCCACCATCTCCCACTCCTGGTCCACTTGATGAACCTGCCAAGTTGAGAGATAATAGTACTGAAAGGAGACCCCCACGCATGGGTCAATCTGCCATGAAGGAGCCTCTCCATTCCTTAAGATTGAAACCGCCACAACAGAATATTTCTCCAGCTATGAGCATTTTACAGAAATACTATGGACTCAAATCTTCGAGTTCAAGAGATACATTCGAAGGAACAGAAATGGCAGTTTACACATCTGTGAGTGCAGATCATTCTACAGGAGAGTGGCTTCCCAAGTCCTCATCAAATTTAGACCCCCCATCAAATGATTACCCCAAGTCAACAAATGTAGCATTCGATCTACTGACTGGAACTGATGAAATGCATGAGTATGTGCCGTTTGCAGATATTGGGGATGGGGGATCTGAGAAGTCCGATGAGAAATCTGTCCGCAGACGTCAGAAAGCTGAAGTTGATAATGGAGCCAGCACACCAGAAAAGATTTTAAAAGAAGGAAATGGTAGTGGATCAAATGGTTTTTCTTCAACTGGGAAAGCATTAAACATGAGGCCAAAATCAGCTAGCCGAGCAGCACTGTTTTCGGAGTCAGAATCAGGATGGCTAGATTCAATTCCAGTGGGGTTGGGAGAATCTATATTTACCGATGGCCTTGCTGGAGTGCGCAAATCGTCAAGTGCATCAAGCCTCAGAGAACAGGAAAAGAATAATTCAGCTCCAGCCTGGCCACCTGCTATATGGAATTTGAAACCAGACTTGCAAGCAGCCATCACAAGACCTATCTTTGATGGTTTACCAATCCCAATAACTGGCCGCAGAAGCAAAGCTGCCCTTGATTAG 1056 0.4612 MSPSNGLQNGGGGGGGNGVSYIEHQVSKLDTLAGVAIKYGVEVADIKRMNGLATDLQMFALKTLRIPLPGRHPPSPTPGPLDEPAKLRDNSTERRPPRMGQSAMKEPLHSLRLKPPQQNISPAMSILQKYYGLKSSSSRDTFEGTEMAVYTSVSADHSTGEWLPKSSSNLDPPSNDYPKSTNVAFDLLTGTDEMHEYVPFADIGDGGSEKSDEKSVRRRQKAEVDNGASTPEKILKEGNGSGSNGFSSTGKALNMRPKSASRAALFSESESGWLDSIPVGLGESIFTDGLAGVRKSSSASSLREQEKNNSAPAWPPAIWNLKPDLQAAITRPIFDGLPIPITGRRSKAALD* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0909 351 PANTHER LOC443603 PROTEIN-RELATED 16 351 IPR045030 -
Apr6g0909 351 MobiDBLite consensus disorder prediction 67 108 - -
Apr6g0909 351 MobiDBLite consensus disorder prediction 199 253 - -
Apr6g0909 351 CDD LysM 22 66 IPR018392 -
Apr6g0909 351 MobiDBLite consensus disorder prediction 206 226 - -
Apr6g0909 351 PANTHER PEPTIDOGLYCAN-BINDING LYSM DOMAIN-CONTAINING PROTEIN 16 351 - -
Apr6g0909 351 SUPERFAMILY LysM domain 22 67 IPR036779 -
Apr6g0909 351 Gene3D LysM domain 17 73 IPR036779 -
Apr6g0909 351 MobiDBLite consensus disorder prediction 236 253 - -
Apr6g0909 351 MobiDBLite consensus disorder prediction 157 178 - -
Apr6g0909 351 ProSiteProfiles LysM domain profile. 22 66 IPR018392 -
Apr6g0909 351 SMART LysM_2 23 67 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0909 Apr-Chr6 13504072 13507360 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0909 - - gmx:100786430 551.206
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0909 6 13504072 13507360 Apr6g0909 6 13504072 13507360 ECH