Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0908 ATGGTCGGCACCTCGAAACCCGGTTCTCCATCCCCAATGGCGCAAGATCTACTCCATTCCCTCTCCCTCCCCAAAACCCTAAAGCTCAAAACCAAACAACAAGAACTCCTCATCCGCGTCGCTGCACTATGCCTCATCTACATCCTCGCCTTCATCACGCGCCTCTTCAGCGTCCTCCGCTACGAATCCATGATCCATGAGTTTGACCCTTACTTCAACTACCGCACCACGCTCTTCCTCACGCGCCACGGCTTCGCCGAGTTCTGGAACTGGTTCGACTCAGAGAGTTGGTACCCTCTCGGCCGCATCATCGGGGGCACGCTCTACCCCGGCCTCATGGTCACCGCCGCCGCAATCTTCTCCGTCCTCCGATTCCTCCGCTTCGCCGTCCACATCCGCGAGGTTTGCGTTTTAACGGCGCCGTTTTTCGCGTCCAACACGACGCTCGTGGCGTACTTCTTCGGCAAGGAGGTATGGGATTCCGGCGCCGGGATCGTGGCGGCGGCGTTGATCGCGATTTGCCCTGGCTACATCTCGCGGTCTGTTGCAGGTTCTTACGATAACGAAGGAGTTGCGATCTTCGCGTTGTTGTTGACGTTTTATCTTTTTGTGAAAGCGGTGAACACAGGGTCGTTGGCTTGGGCTTTGGCTTCGGCGTTTGGGTACTTCTATATGGTGTCTGCGTGGGGTGGTTATGTTTTTATCATCAATTTGGTTCCGCTTTATGTGTTGGTTTTGTTGGTGACTGGGAGGTACTCGATGAGGCTCTATGTTGCTTATAATTGCATGTATGTGTTGGGAATGTTGCTTGCCATGCAGATTAGGTTTGTGGGGTTCCAGCATGTTCAGTCTGGAGAGCACATGGCTGCTATGGGCGTCTTTTTCTTGCTTCAGGTGTTTTTCTTCTTGGATTGGGTGAGGCATTTGCTTAGTGACACAAGATTGTTTCAAGCATTTTTGAGGATCACTGTTACTGGTGCAGTCACTGTTGGTGCTGTTGCTTTGGGAGTAGGCACAGCATCTGGTTATATATCTCCATGGACTGGACGGTTTTACTCGTTGCTTGATCCAACATATGCTAAGGATCACATTCCAATTATTGCGTCTGTCTCTGAGCATCAGCCAACTGCTTGGTCATCATTCATGTTTGATTTTCACATCTTGCTGTTCTTTTTCCCTGCTGGGCTTTATTTTTGCTTCAAGCGCTTGTCAGATGCCACAATCTTCATAGTTATGTATGGTCTTACGAGCATGTATTTTGCTGGGGTTATGGTTCGACTAATTCTTGTTGCTACCCCTGCTGTATGCCTCATCAGTGCTATTGCGGTTTCTGCCACTGTGAAGAATTTGACTCGCTTAGTGAGGGCCAAAAGCCAAGCTGTTCAAAGTGGTTCTGGTAAAGGAACTAGTGCTGCAAAAGGTTCTTCGAAGGGTGTAGTTGATAATTCCCAGCCTTTCCAAAAGAATGGTGCCATTTTGTTGCTTCTTGGTGCTTTCTATTTACTCAGTAGATATGCTATTCACTGCACTTGGGTCACATCAGAGGCTTACTCATCTCCCTCAATTGTCTTGGCTGCAAGGGGTGCCCACGGTAACAGGGTTATCTTTGATGATTATCGTGAGGCTTACTTTTGGCTTCGCCAGAACACTCCACCAGATGCTAAAGTGATGTCATGGTGGGATTATGGTTATCAAATCACTGCCATGGGAAACAGAACAGTTATTGTTGACAATAACACCTGGAACAATACACACATAGCTACTGTTGGGCGTGCAATGTCATCTTATGAGGATGAGGCTTATGAAATAATGAGATCACTTGATGTGGACTATGTATTAGTTGTGTTTGGTGGGGTTACTGGTTATTCTTCTGATGATATTAATAAATTTCTGTGGATGGTAAGAATTGGTGGTGGGGTTTTTCCTGTGATAAAGGAACCTGATTACCTTGTCAATGGAGAATATCGTGTAGATAAAGGAGCGGCTCCCAAGATGTTGAACTGTCTTATGTACAAGCTTTCTTATTATCGGTTTGGGGAGCTGACAACAGAATATGGCAAACCACCTGGGTATGATCGCGCTAGAGGTGTTGAAATTGGAAATAAGGACATAAAGCTTGAGTACTTGGAAGAGGCGTTTACTACGCAGAATTGGATAGTTCGTATTTATAAAGTGAAACCACCTAAAAACAGGTGGTAA 2199 0.4702 MVGTSKPGSPSPMAQDLLHSLSLPKTLKLKTKQQELLIRVAALCLIYILAFITRLFSVLRYESMIHEFDPYFNYRTTLFLTRHGFAEFWNWFDSESWYPLGRIIGGTLYPGLMVTAAAIFSVLRFLRFAVHIREVCVLTAPFFASNTTLVAYFFGKEVWDSGAGIVAAALIAICPGYISRSVAGSYDNEGVAIFALLLTFYLFVKAVNTGSLAWALASAFGYFYMVSAWGGYVFIINLVPLYVLVLLVTGRYSMRLYVAYNCMYVLGMLLAMQIRFVGFQHVQSGEHMAAMGVFFLLQVFFFLDWVRHLLSDTRLFQAFLRITVTGAVTVGAVALGVGTASGYISPWTGRFYSLLDPTYAKDHIPIIASVSEHQPTAWSSFMFDFHILLFFFPAGLYFCFKRLSDATIFIVMYGLTSMYFAGVMVRLILVATPAVCLISAIAVSATVKNLTRLVRAKSQAVQSGSGKGTSAAKGSSKGVVDNSQPFQKNGAILLLLGAFYLLSRYAIHCTWVTSEAYSSPSIVLAARGAHGNRVIFDDYREAYFWLRQNTPPDAKVMSWWDYGYQITAMGNRTVIVDNNTWNNTHIATVGRAMSSYEDEAYEIMRSLDVDYVLVVFGGVTGYSSDDINKFLWMVRIGGGVFPVIKEPDYLVNGEYRVDKGAAPKMLNCLMYKLSYYRFGELTTEYGKPPGYDRARGVEIGNKDIKLEYLEEAFTTQNWIVRIYKVKPPKNRW* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0908 732 Pfam Oligosaccharyl transferase STT3 subunit 40 518 IPR003674 GO:0004576|GO:0006486|GO:0016020
Apr6g0908 732 Gene3D - 535 685 - -
Apr6g0908 732 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B 23 732 - -
Apr6g0908 732 PANTHER DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 23 732 IPR003674 GO:0004576|GO:0006486|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0908 Apr-Chr6 13497592 13504162 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0908 1 731 Miscellaneous Gene Families AT1G34130 86.376 0.0 1285
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0908 K07151 - gmx:100780916 1337.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0908 6 13497592 13504162 Apr6g0908 6 13497592 13504162 ECH