Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0906 ATGGCATTTGCTAGTGCAACAGCGATCGCTTCCTCTCTGTATGGCGTTGCGCGCGTGGGTTACTGTGACCCGAAGGTTCCATTTGTGGGTTCAGGGTTTTGTGGTTCCGCTTTTTGCGTTGGGTCGCACGCAGGGAAGAGCGATGTGGTGCTTGAAAGGAGGAAGTTGAAGAAGGTCGATACACGCACTGTTGAGAATTCGCCGATGAAATCGAGTGTTGAAATTGAAATCCCAGTTTCTTGCTATCAGCTTATTGGTGTTCCTGATCGAGCCGAGAAAGATGAAATTGTTAAGGCAGTTATGGGTTTGAAAAATGCAGAAATTGATGAAGGTTATACAATGGATGTTGTTACAGCTCGGCAGGATCTTCTAATGGATGTTAGGGATAAGCTTCTTTTTGAGCCAGAGTATGCTGGTAACCTGAGGGAAAAGATTCCCCCTAAATCTTCCCTTCGAATTCCTTGGTCTTGGTTGGCAGGTGCTCTATGCCTTCTTCAAGAGGTTGGAGAATCAAAGCTTGTGCTGGACATTGGACGGACAAGTATTCAGCATCAAGACGCCAAGCCATACACAGACGACTTGATTCTCTCTATGGCACTAGCTGAGTGTGCAGCTGCGAAGATTGGCTTTGAGAAGAAAAAAGTATCTCAAGGTTTTGAAGCTCTTGCTCGTGCCCAGTGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTGCTATCACAGATTGAAGAATCTCTTGAAGATCTTGCACCTGCTTGCACCTTGGAACTACTGAGCATGCCACATACTCCTGAAAATGTTGATCGAAGAAGACGAGCAATTGCGGCTCTGCGTGAATTGCTCAGGCAGGGTCTTGATGTTGAAGCTTCATGCCAAGTGCAGGACTGGCCTTCCTTTCTAAGCCAAGCATTCGACAGTTTGCTGGCAAAAGAGATAGTTGATCTTCTTCCTTGGGATAACTTAGCTGTGATGCGAAAGAATAAGAAGACTATTGAATCACAGAATCTAAGGGCAATAATTGATTCAAACTGTTTCTATAGAGTTTTTACAGCTCATATGGCACTTGGGTTTTCAAGCAAGGAAAAAGAGTTGATTAACAAAGCAAAAGGCATATGTGAATGTTTGATATCTTCAGAAGGTATTGATTTGAAATTTGAGGAAGCTTTTTGCTTATTCCTGCTTGGACAGGGCACAGAATCTGAGGTGGTTGAAAAGCTTAAGCAGCTTGAGCTGAATTCAAATCCAAAAAATAATTCAATCTTGGGAAAGGCAATAATCGATGCTTCTGCTGTGAACCCATCACTGGAAATGTGGCTGAAGGATTCTGTGCTTGCATTATATCCAGATACTAAAGATTGTTCTCCAGCTTTGGCCATTTTCTTTAATGCTCAGAAGAAATTTTCTGGAAGCAAGAATTCTAAAGGAGCTTTACAAACATTACCTGCTATATGTCATAGACCTCTATCCGCATCTGGTTTGTTTGAGCAAAGCGATGTTGAGGAACCTCGCACATATGTGAACTCTTCTCCTAATCTAGGTTTTGCTGTCAAGCAGCTGACTCCAACTGATTTGCAAAGTTCACTGTTATCTGGAAAAATTGAAAATGGAAACAATCCTAGCGAGTCACCTATTCAAGTGCAAAGGAAACTTGGTAGTCATCACAATTCAGGAATTTGGGATAGTCACTTCATTCGTGGACACATATTTGAAAGAATAACATATATTACCGTATTGGGTTGTATATCATTTGCTACCATTAAGTTGTCGGGAATGAGCCTGAGCAAGACTCTCACTGGCTCTCATTTTGCTTTTACTAAAGCCAATGGTGACATTACTTGGACTACAGATACATCTGACTACACTGTAGGTCCTGCTTATATTAGACAAAGTATTATTGCCAACAAACTGAAGAAATTCCTGTCAATGTTTAGGATACAGTTGTTGCACCAGTCAGATGCTGGAAATCAAAGTAATTTACACACTACTCTTGCCTCATCATCCTCCCCAATTAATGTGTACAGAAGCCTGATGCCTGTGGAAGAAGCCGAAACCCTTGTTAGGCAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAATTAATTGCCTAGCTGAAGTTCTTGACGAATCTATGCTTGCTCAGTGGCAAGCTTTGGCTAATACTGCAAAAGAAAAATCGTGTCACTGGAGATTTCTTTTGCTGAAATTATCCGTCCTACGAGCTGACATTCTGTCAGATGGAAATGGAGCTGACATGGCAGAAATAGAAGCTCTCTTAGAGGAAGCAGCTGAACTCATTAATGGTTCTGAGCAAAAAAACCCAAACTACTATAGCACATACAAAGTTAAGTATGTTATGAAGAGGCAAGATGATGGATCATGGAGGTTCTGTGAAGGTGATATACGAACACCATGA 2430 0.4185 MAFASATAIASSLYGVARVGYCDPKVPFVGSGFCGSAFCVGSHAGKSDVVLERRKLKKVDTRTVENSPMKSSVEIEIPVSCYQLIGVPDRAEKDEIVKAVMGLKNAEIDEGYTMDVVTARQDLLMDVRDKLLFEPEYAGNLREKIPPKSSLRIPWSWLAGALCLLQEVGESKLVLDIGRTSIQHQDAKPYTDDLILSMALAECAAAKIGFEKKKVSQGFEALARAQCLLRSKPSLAKMTLLSQIEESLEDLAPACTLELLSMPHTPENVDRRRRAIAALRELLRQGLDVEASCQVQDWPSFLSQAFDSLLAKEIVDLLPWDNLAVMRKNKKTIESQNLRAIIDSNCFYRVFTAHMALGFSSKEKELINKAKGICECLISSEGIDLKFEEAFCLFLLGQGTESEVVEKLKQLELNSNPKNNSILGKAIIDASAVNPSLEMWLKDSVLALYPDTKDCSPALAIFFNAQKKFSGSKNSKGALQTLPAICHRPLSASGLFEQSDVEEPRTYVNSSPNLGFAVKQLTPTDLQSSLLSGKIENGNNPSESPIQVQRKLGSHHNSGIWDSHFIRGHIFERITYITVLGCISFATIKLSGMSLSKTLTGSHFAFTKANGDITWTTDTSDYTVGPAYIRQSIIANKLKKFLSMFRIQLLHQSDAGNQSNLHTTLASSSSPINVYRSLMPVEEAETLVRQWQTIKAEALGPSHEINCLAEVLDESMLAQWQALANTAKEKSCHWRFLLLKLSVLRADILSDGNGADMAEIEALLEEAAELINGSEQKNPNYYSTYKVKYVMKRQDDGSWRFCEGDIRTP* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0906 809 Coils Coil 757 777 - -
Apr6g0906 809 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 58 806 IPR044685 -
Apr6g0906 809 Pfam ARC6-like, IMS domain 684 801 IPR025344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0906 Apr-Chr6 13484819 13490670 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0906 - - gmx:100818147 1340.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0906 6 13484819 13490670 Apr6g0906 6 13484819 13490670 ECH