Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0904 ATGGCTCAAAGTGGAAATGGTGACAATGGTTTTGAATCTCTTGATCATGCAGATGACGATGATGTGAAAAAACTAAGCCAAAAGGGCATCAAAAAACACCAAGAGGAAGAGGTTTCTGTGGAGAGGGTGTTCCAGCACCTTTTGGTTCCCTCATGGAAGAACCAGTTAACTTTGAGAGCCTTTGTTGTCAGTTTTGCACTCAGCATACTCTTCAGTTTCATTGTTATGAAACTCAACCTTACCACTGGTATCATACCTTCACTCAATGTCTCTGCTGGCCTTCTTGGGTTCTTCTTTGTGAAGACTTGGACCAAGTTCTTGGAAAAATCTGGCATGTTGAAGCAACCCTTTACAAGGCAGGAGAACACTGTCATCCAAACCTGCGTTGTTGCCTCATCTGGCATAGCCTTTAGTGGAGGATTTGGGAGTTACCTCTTTGGAATGAGTGAACGCATAGCCAAGCAATCCACAGACACCAGTGATTTTAAGGACCCAAAATTAGGGTGGATAATTGCTTTTCTCTTTGTTGTTAGCTTCCTTGGTCTTTTCTCAGTTGTACCTCTAAGAAAGATTATGATCATTGACTTCAAATTGACATATCCGAGTGGTACTGCAACTGCCCATCTCATCAACAGCTTCCACACTCCCCAGGGAGCCAAACTAGCAAAGAAGCAAGTGAAAGTGTTGGCAAAATTCTTCAGTTTTAGTTTCTTATGGGGTTTCTTTCAATGGTTCTATACAGCTGCTGACCAGTGTGGATTTCAGGCCTTCCCTTCGTTGGGGCTCAAAGCATATGAAAACAGGTTTTATTTTGATTTTTCTGCAATCTATGTCGGAGTGGGAATGATATGCCCATATATCATAAATATATCAGTGCTTCTTGGAGGAATTATTTCTTGGGGCATAATGTGGCCTCTCATTAAAAACAAAGAGGGTGATTGGTATGACAAGGGCCTTGGTGAAAGCAACCTTCATGGCATCCAAGGTTATAGGGAAATCTCGCAAAAACAAAGGGAGAATGTCCTTCCTGTTGCAGATCAAGACTCTCCCTCGAATCCTCAGCAATCATATGATGACCAGCGCCGCATCCAACTCTTCCTTAAAGATCAGATTCCAACATGGTTTGCAGTTGGAGGTTATGTTGCCATTGCTGCCATCTCTACAGCCACTCTGCCACACATCTTTCACCAACTAAAATGGTATTACATACTTGTTATCTACCTTCTTGCCCCCACCTTAGCATTTTGCAATGCTTATGGTTGTGGGCTAACAGATTGGTCCCTTGCATCCACCTATGGAAAGCTTGCCATCTTCACAATTGGAGCATGGGCTGGTGCAGCACATGGTGGAGTTCTTGCTGGCCTAGCAGCCTGTGGAGTGATGATGAACATTGTTTCCACAGCTTCAGACTTGATGCAGGATTTTAAGACCGGCTACCTTACTCTAGCTTCGCCGCGCTCAATGTTTGTGAGCCAAATAATTGGCACTATAATGGGTTGTGTGATTTCTCCTTGTGTATTTTGGATTTTCTACAAAGCTTTTCCTGACCTTGGAACTAGTACAAGCGAATACCCTGCCCCGTATGCAATTGTGTACCGTAACATGGCGATGTTGGGGGTGCAAGGTTTTGACTCTCTACCAAAAAACTGCCTCTTACTTTGTTATATATTCTTTGGTGCTGCCATTGTAATAAACTTGATCAAAGATTTCCTTGGTAAGAAAGGGAGGTTCATACCACTTCCAATGGCTATGGCAATACCTTTCTATATAGGATCATACTTTGCCATTGACATGTGTGTCGGAAGTTTGATATTATATGTGTGGGAAAGGATTAACAAGGCTAAGGCAGATGCTTTTGGACCAGCTGTGGCTTCTGGTTTGATATGTGGAGATGGAATATGGACTCTACCTGCTTCAATTCTTGCTCTTGCTGGAGTTAAGCCTCCAATTTGTATGAAGTTCTTGTCTAGGGCCACAAATCAAAGGGTTAATACTTTCTTAGGGAATTAA 2010 0.4279 MAQSGNGDNGFESLDHADDDDVKKLSQKGIKKHQEEEVSVERVFQHLLVPSWKNQLTLRAFVVSFALSILFSFIVMKLNLTTGIIPSLNVSAGLLGFFFVKTWTKFLEKSGMLKQPFTRQENTVIQTCVVASSGIAFSGGFGSYLFGMSERIAKQSTDTSDFKDPKLGWIIAFLFVVSFLGLFSVVPLRKIMIIDFKLTYPSGTATAHLINSFHTPQGAKLAKKQVKVLAKFFSFSFLWGFFQWFYTAADQCGFQAFPSLGLKAYENRFYFDFSAIYVGVGMICPYIINISVLLGGIISWGIMWPLIKNKEGDWYDKGLGESNLHGIQGYREISQKQRENVLPVADQDSPSNPQQSYDDQRRIQLFLKDQIPTWFAVGGYVAIAAISTATLPHIFHQLKWYYILVIYLLAPTLAFCNAYGCGLTDWSLASTYGKLAIFTIGAWAGAAHGGVLAGLAACGVMMNIVSTASDLMQDFKTGYLTLASPRSMFVSQIIGTIMGCVISPCVFWIFYKAFPDLGTSTSEYPAPYAIVYRNMAMLGVQGFDSLPKNCLLLCYIFFGAAIVINLIKDFLGKKGRFIPLPMAMAIPFYIGSYFAIDMCVGSLILYVWERINKAKADAFGPAVASGLICGDGIWTLPASILALAGVKPPICMKFLSRATNQRVNTFLGN* 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0904 669 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 330 668 - -
Apr6g0904 669 PANTHER METAL-NICOTIANAMINE TRANSPORTER YSL8-RELATED 22 331 - -
Apr6g0904 669 MobiDBLite consensus disorder prediction 1 20 - -
Apr6g0904 669 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 22 331 IPR045035 GO:0035673
Apr6g0904 669 PANTHER OLIGOPEPTIDE TRANSPORTER YGL114W-RELATED 330 668 IPR045035 GO:0035673
Apr6g0904 669 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 363 642 IPR004813 GO:0035673
Apr6g0904 669 TIGRFAM OPT_sfam: oligopeptide transporter, OPT superfamily 54 330 IPR004813 GO:0035673
Apr6g0904 669 Pfam OPT oligopeptide transporter protein 55 329 IPR004813 GO:0035673
Apr6g0904 669 Pfam OPT oligopeptide transporter protein 330 641 IPR004813 GO:0035673
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0904 Apr-Chr6 13469308 13474223 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0904 13 508 Organic Solute Cotransporters AT1G09930 20.486 1.06e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0904 - - mnt:21389545 1036.56
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0904 6 13469308 13474223 Apr6g0904 6 13469308 13474223 ECH