Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0903 ATGGCGAGGAAGATGCCCTGTGCCCTTCAAGAGATAGGTAATGATAGTCCAAAAGTTTCAGAAGCAAGAAAGGATTCCTTATCAACCGTATATCAACAACAAAATAAATTCAATTCTTTGGAGGTTTGTCAAGAATCTTCTCTTTCAAGGATTAACTCTGATAGTAGGTGTGCCATCATTTCATGCTATAACCTTGAGCCTGATGGAATCTGGAAAATTGTTGCCCAATTTGTGCAGTGTCACAATCACATTAACTTAGCTTCTGGTGTAAATATGGATGGTCTGCAACTTCTTTACCTTCCATCTCTTAATAGTTTGAAGATTGATCAATGTAAGGGGTCCAGAGGGCCTGTTCCTCCTTATGCTTCTTCAGTGAAATCATGTTCGAAAAAAGGCTTTACTGGTTCAAATGTGCGTCGTCGATGTCAAAATAAGATTGCTAGCAGAGCTTCTAAACTGAATGAACTACCTGAGAATTCTTGTTCACAGAGTTGTAGCCCTGTCTTGTTCTCTGACAGTTCTTCTGCAGTTAATTCCTCTGATAAATATAAGAGTGAATCCAAGGAAGACAAGTCTTTGAAGAAAAATTCAAGAAAAAGGACAAGAAAGAAAGTTAGACAGAGTAAGAAGAAGTCAAGTGACAGTGGCTCTCCGGAACAAGAAGTTCTTGCTGAGGAATATGTCTCTGCAAGTTTGGCTTCTGAAACCTGCAGCAGCAATGATGCGGATAAGGAGGTTGGGCTGATGTATACAACTGCACCAGACTTTTCTTCTTCAGATGATAGATTAATAAAAACTGATTATGAAAAAAGTGAGGTGAATGACAGCATCACTGCTATGGAAGCATCTAGTAGTTTCAACTCTTATCTTGATGAGGCAGTGATGTCCAAAGCTAGTGCACCTATTGTTCAAAGTTCTGCAGGAGATTGTGCCACATTTGAGTCCATGAATCAGCTCCAGGCTGGGGGCTGTGATTTTGCAGTCATTGATAGAGAAGTAAAGGACATCCAACATATTGATCCTTGCTGTTTTAATGATATACAAGACTCTTTGGTATTGGATTCAGTTTCCATTAGTTCAAAAAGTGATCAAAGTACCAATGCTGATGATATAGGAAAACGATCCAACGATATAAGCTGCAGAATCACTTCAGATTCAGGAGATGGGTACTTTCTTAGTCAAAACTTAACGAACAATGTTCACAATAACTCTGAACATAATGAGGAGATTAGGCATGATGGTCAAAGTTGCATCAGTAATGATAAGAGAGTTAAGCAAAAAAGAACAATGTCGAAGAGTTCAAGTTCCAACAAGTTTGGGGGTGTTGGAAATTTGCATGGTCGAACAGGGAAGGAAAACAGTCATTCTGTCTGGCAAAAAGTTCAGAAGAACAGTTCTGATGAATGTGTTGGTGATTTGAAGAAAGTGAACACTAGTCTATCACAGTTTTCTTCCACCATGGAAAAGGATCCTTCAGTTATCAGAGACTCTAGCTCTGTCAGTGTAAATGTGGTATCAAAAACTGAGGATAAAAAACAGTCAAAAAATAAAGTTGGTAGGAAATCAAAAGGTAAAACGAGCTCAGTTTCAAAAAAAGGACACTGCAATTATTCTAGGAAGGGTTCCCATTTTAACAGGTCTCTGTTGAATGGTCATGGGAAGGTTAGTGTTCAGCAGAATGATATGTTGCATATCTCATCTCAGGAAATCAATCAACAAGGATTGAACACTGTCTCAGGATTCAATTCTGATATTAATTGCCTGATGGATGGGGTCCAGACCAATGGAGGAGTTGATCAAGAAACATCTAAAATAGTTCACAGTGCTGGATTCCATCCAGAGAAGTTAAATCCTCAAAAAAATGCTTGCCATACTATTGCAAACATGAAGGATGAAAATATTGACATTCAAGATAGTTTATTGGTAATGCAATGTGAGAACAATCAATCGGATACGTCTGAGGAGCAATCTCTAGTGTCCTCTAGTCTTTTAGGTGATGAAGTTGGTCAAACTAAGAAAGAAGAATCTTCCGCAGACTACATTGCCCCAAACCACAGTTCTGGATCTACCCTATGGAAATGGATACCGATTGGGAGAAAGAATACAGGGTTGGAAATTTCTGAATCTAATAGTTCATCACAAGAATACTCTGATGCACCCACTTGTAATAATTTTAACTTGGAAAGCAGTGTTGAACCAAAATTGGCCTCCTTTTCTGAAAATCAGGATTCTTCACTAAATGCAAGCAGAAAATGCATTAGTCAGATTAATGACAAAGTTTCTTGTCCTGATGAGGATGAGAATCATAAAATGGGTAGTCAGGTTGCATGTACATTGACAGAGCACAAGGACAAGCTTGAAGTAGCTAATTGCATGGGTGATGAACGTGAAAATAAAGATATGTTAGAAAATGAGTCATACAGAATAGCTCAAGCTGTGAATGATGTTTGTAGGGCACAAATATCTTGTGAAGCTGTACATATGGCTACAGGTTTTCCAGTTGCAGAGTTTGAAAAACTACTTCATTTTTGTAGTCCTGTTATTTGTGAATCACTAGATTCACTCGGTTGTTCAACATGCTCCCACGACCATGCTGGTGGTGTCTCACTGTGCAGACATGAGATTCCTGACCTACCTTTGGGCTGCCTGTGGCAGTGGTATGAGAAACATGGGAGCTATGGGTTAGAGATATGGGCTCAGGATTGTGAAAATCTGAAGAGACAAGGAGGTGTTGGTTATTTTCCATTTCGTGGCTATTTTGTCCCTTCTTTATCAGCAGTTCAGCTGTTTAAGAACCACGAAAATCAAAGTCTAAATAGCAATGACAAGATTCCATATTGTGAGGTTTCAGAGGCATGTGATATGGTTGACTCAGAAAACTCGTCTTCTGGCAATCAACATTCAATATTTTCTGTTCTCATTCCCCAGCCTCGCAATCAGGATGCATACATTCAAACACCAAAGAAGATGCTTTCTATCAATGATGCATCTAATCCACCTATCAACTCAGCATGCCCTCGTGGTTTAGAACTTCTTTTTGAATATTTTGAATTTGAACAACCTCAACAAAGACGGCCTCTATATGAGATGATACAAGAACTGGTTAGAGGCAATATAACAATCCGGTCTACAACTTATGGGGACCCAACTATGCTGGACTCAGTAAACCTACGGGACCTTCACCCTAGATCTTGGTACTCAGTAGCATGGTATCCTATTTACCGAATACCAGATGGCAACTTTCGTGCAGCCTTTTTGACTTACCATTCACTTGGACATTTGGTACACAGAAGTACAAGTTCTGGTTTTTCAACCATAGATTCTTGCACTGTATCTCCAGTTGTGGGTCTTCAAAGTTACAATGCCCAGGGTGAATGCTGGTTCCAGCTGAATCATTCTGCTCTGGCAGCACAAGGGCTGGGCTTAAACCCTTCTTTAGTTCTCCAAGAGCGTTTGAGGACACTTGAGGAAACAGCATCTCTAATGGCAAGAGCTGTTGTCAACAAGGGAAACCTAAACTGTACTAACAGACATCCTGATTATGAGTTTTTCTTGTCTCGGCGACGGTATTGA 3573 0.3969 MARKMPCALQEIGNDSPKVSEARKDSLSTVYQQQNKFNSLEVCQESSLSRINSDSRCAIISCYNLEPDGIWKIVAQFVQCHNHINLASGVNMDGLQLLYLPSLNSLKIDQCKGSRGPVPPYASSVKSCSKKGFTGSNVRRRCQNKIASRASKLNELPENSCSQSCSPVLFSDSSSAVNSSDKYKSESKEDKSLKKNSRKRTRKKVRQSKKKSSDSGSPEQEVLAEEYVSASLASETCSSNDADKEVGLMYTTAPDFSSSDDRLIKTDYEKSEVNDSITAMEASSSFNSYLDEAVMSKASAPIVQSSAGDCATFESMNQLQAGGCDFAVIDREVKDIQHIDPCCFNDIQDSLVLDSVSISSKSDQSTNADDIGKRSNDISCRITSDSGDGYFLSQNLTNNVHNNSEHNEEIRHDGQSCISNDKRVKQKRTMSKSSSSNKFGGVGNLHGRTGKENSHSVWQKVQKNSSDECVGDLKKVNTSLSQFSSTMEKDPSVIRDSSSVSVNVVSKTEDKKQSKNKVGRKSKGKTSSVSKKGHCNYSRKGSHFNRSLLNGHGKVSVQQNDMLHISSQEINQQGLNTVSGFNSDINCLMDGVQTNGGVDQETSKIVHSAGFHPEKLNPQKNACHTIANMKDENIDIQDSLLVMQCENNQSDTSEEQSLVSSSLLGDEVGQTKKEESSADYIAPNHSSGSTLWKWIPIGRKNTGLEISESNSSSQEYSDAPTCNNFNLESSVEPKLASFSENQDSSLNASRKCISQINDKVSCPDEDENHKMGSQVACTLTEHKDKLEVANCMGDERENKDMLENESYRIAQAVNDVCRAQISCEAVHMATGFPVAEFEKLLHFCSPVICESLDSLGCSTCSHDHAGGVSLCRHEIPDLPLGCLWQWYEKHGSYGLEIWAQDCENLKRQGGVGYFPFRGYFVPSLSAVQLFKNHENQSLNSNDKIPYCEVSEACDMVDSENSSSGNQHSIFSVLIPQPRNQDAYIQTPKKMLSINDASNPPINSACPRGLELLFEYFEFEQPQQRRPLYEMIQELVRGNITIRSTTYGDPTMLDSVNLRDLHPRSWYSVAWYPIYRIPDGNFRAAFLTYHSLGHLVHRSTSSGFSTIDSCTVSPVVGLQSYNAQGECWFQLNHSALAAQGLGLNPSLVLQERLRTLEETASLMARAVVNKGNLNCTNRHPDYEFFLSRRRY* 1191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0903 1190 MobiDBLite consensus disorder prediction 405 428 - -
Apr6g0903 1190 MobiDBLite consensus disorder prediction 482 547 - -
Apr6g0903 1190 MobiDBLite consensus disorder prediction 529 547 - -
Apr6g0903 1190 PANTHER PHOTOSYSTEM II STABILITY/ASSEMBLY FACTOR HCF136, CHLOROPLASTIC 5 1189 - -
Apr6g0903 1190 MobiDBLite consensus disorder prediction 405 453 - -
Apr6g0903 1190 MobiDBLite consensus disorder prediction 482 507 - -
Apr6g0903 1190 MobiDBLite consensus disorder prediction 172 223 - -
Apr6g0903 1190 PANTHER DUF789 FAMILY PROTEIN 5 1189 - -
Apr6g0903 1190 MobiDBLite consensus disorder prediction 195 209 - -
Apr6g0903 1190 Pfam Protein of unknown function (DUF789) 835 1184 IPR008507 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0903 Apr-Chr6 13455988 13464616 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0903 - - aprc:113867773 2288.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0903 6 13455988 13464616 Apr6g0903 6 13455988 13464616 ECH