Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0837 ATGGCGTTGAAAGACACGTTCTACATATCTCATGGATCCCCCACTTTGTCCATAGATGAGTCCATTGAAGCTAGGACGTTCCTTCAATCATGGAAGAAGGACGTGTTTTCACAAAAACCCACTTCAATTCTTGTCATTTCCGGTCATTGGGACACCGCAGTTCCCACCGTTAACGTTGTTGACACCATCAACGAAACCATCTACGATTTCTATGGCTTTCCCAAACAAATGTACAAGCTTAAATATCCAGCACCTGGAGCTCCACGCTTGGCAAGGAGGGTCAAGGAACTACTAAAGAAATCTGGTTTCGGACGTGTTGATGAAGATACAAAGCGAGGACTGGACCATGGTGCTTGGGTTCCTCTTATGTTGATGTACCCAGAAGCTGACATCCCAGTTTGTCAGCTATCTGTTCAATCAGGCCAGGATGGGACTCACCATTATAACTTAGGAAAGGCATTGGCCCCTCTTAAAGATGAAGGTGTATTGATTATGGGTTCTGGAAGTGCTATTCACAACTTGAGAGCAATTGATCCTCACTCCTCTGTTGCTCCGTGGGCTCTACAATTTGATAATTGGTTGAAAGAAGCTCTTCTTGAAGGAAGATATGAAGATGTAAATCATTATGAACAGAAAGCGCCACATGCGAAAAAGGCTCATCCCTGGCCAGATCACTTTTATCCACTGCACGTTGCAATTGGTGCTGCCGGTGAAAATGCAAAGGCCAAACTTATCCACAGCAGTATTGAAATGAGCAGTCTCTCTTATGCCTCTTACCAGTTTACATCAACTACCAGCTGA 801 0.4444 MALKDTFYISHGSPTLSIDESIEARTFLQSWKKDVFSQKPTSILVISGHWDTAVPTVNVVDTINETIYDFYGFPKQMYKLKYPAPGAPRLARRVKELLKKSGFGRVDEDTKRGLDHGAWVPLMLMYPEADIPVCQLSVQSGQDGTHHYNLGKALAPLKDEGVLIMGSGSAIHNLRAIDPHSSVAPWALQFDNWLKEALLEGRYEDVNHYEQKAPHAKKAHPWPDHFYPLHVAIGAAGENAKAKLIHSSIEMSSLSYASYQFTSTTS* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0837 266 CDD 45_DOPA_Dioxygenase 6 261 IPR014436 GO:0008270|GO:0016701
Apr6g0837 266 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 261 IPR004183 GO:0006725|GO:0008198|GO:0016491
Apr6g0837 266 Gene3D - 2 262 - -
Apr6g0837 266 PANTHER UNCHARACTERIZED 3 264 - -
Apr6g0837 266 PIRSF Doxgns_DODA 1 263 IPR014436 GO:0008270|GO:0016701
Apr6g0837 266 PANTHER EXTRADIOL RING-CLEAVAGE DIOXYGENASE-LIKE 3 264 - -
Apr6g0837 266 SUPERFAMILY LigB-like 6 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0837 Apr-Chr6 12821701 12824251 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0837 K15777 - gmx:100798236 503.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0837 6 12821701 12824251 Apr6g0837 6 12821701 12824251 ECH