Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0836 ATGAACAAAATATTGAGATTTTGTTTCAATTGGGCTGATTCTAGGCCAAGTAAAAAAGAAGAGAATAATAGTAATATCATGGGGTCGAAATTGAAAGAGACATTCTACATATCACATGGATCACCAACACTAGCCATAGATGATTCAGTCCCTGCATGGAAGTTCTTATCATCTTGGAAGGAGCTGTTTCCGCCGCGACCCTCTTCCATTCTCATCATCTCCGGCCACTGGGACACCCATGTTCCCACGGTCAACGTCGTTGACCAAAATCATATCATCGAAGATTTCTATGGTTTCCCCCAAGCCATGTCCACGCTTAAGTATCCGGCACCTGGGGCACCACACTTGGCAAAGAGGGTGAAGGAGTTACTGATAGCATCAGGGTTTAGCCGTGTGGATGAAGATAGGAAACGTGGGCTTGATCATGGTGCATGGGTACCTCTCATGTTGATGTACCCTGAAGCAGATATTCCAGTGTGTCAACTCTCTGTCTCATCTAAGAGAAGTGGCATTTATCACTATAACATGGGAAAGGCTTTGGCTCCTCTTAAGGATGAAGGTGTTCTAATCATTGGCTCTGGGAATGCCACCCATAACCTCAGAGCAATGACATACCGTAATAGCCCTCCTCCTCCCTGGGCTACAGCTTTTATTTCCTGGCTAAAAAGCTCTCTTCTTGATGGAAGATACGAGGAAATAAATCAATTTGAAGAGAATGCCCCATATGCAAAAGTGGCTCATCCCTGGCCAGATCATTTCTTTCCATTGAATGTGGCCTTGGGAGCTGCTGGTGAAAAAGCAAAGGCCAAACTTGTACATGATAGTTGGGATTATGGTTCTGTGTCTTATGCTTCTTTTGGTTTTACAGCAGCTACTAACAGTTGA 885 0.4441 MNKILRFCFNWADSRPSKKEENNSNIMGSKLKETFYISHGSPTLAIDDSVPAWKFLSSWKELFPPRPSSILIISGHWDTHVPTVNVVDQNHIIEDFYGFPQAMSTLKYPAPGAPHLAKRVKELLIASGFSRVDEDRKRGLDHGAWVPLMLMYPEADIPVCQLSVSSKRSGIYHYNMGKALAPLKDEGVLIIGSGNATHNLRAMTYRNSPPPPWATAFISWLKSSLLDGRYEEINQFEENAPYAKVAHPWPDHFFPLNVALGAAGEKAKAKLVHDSWDYGSVSYASFGFTAATNS* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0836 294 PIRSF Doxgns_DODA 27 290 IPR014436 GO:0008270|GO:0016701
Apr6g0836 294 Gene3D - 21 289 - -
Apr6g0836 294 CDD 45_DOPA_Dioxygenase 34 288 IPR014436 GO:0008270|GO:0016701
Apr6g0836 294 PANTHER AROMATIC RING-OPENING DIOXYGENASE, CATALYTIC PROTEIN 30 292 - -
Apr6g0836 294 SUPERFAMILY LigB-like 34 288 - -
Apr6g0836 294 Pfam Catalytic LigB subunit of aromatic ring-opening dioxygenase 34 288 IPR004183 GO:0006725|GO:0008198|GO:0016491
Apr6g0836 294 PANTHER UNCHARACTERIZED 30 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0836 Apr-Chr6 12814953 12818431 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0836 K15777 - gmx:100810694 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0836 6 12814953 12818431 Apr6g0836 6 12814953 12818431 ECH