Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0819 ATGAAGGCTTTTGTGCTGCGTTTGTTACCTCTTGTGTTTGTTCCTCTGTTTCTTTCCCTATTGTTATTAGCGCTTATGCCAAAGGAAACCGCTATGAGAACCTATGAGGTGTTTGGAGTGAAGATAGAGAAGAACCCACCTCAGTCCAAACTCAGTGAGCTTGGAGTCTCAACTTGGTCCAAATGGGAAAGTGGTCCTACAAAAATACCGTGGTCCTTTAAAGTTGAAGAGACTATGTATCTGCTAGAGGGAAAAGTGAAGGTTACTGTTGAAGAATCTGTTGGATCTTTTGAAATTGGGGCTGGTGATTTAGCTGTTTTCCCAAAAGGAATGAACATTACTTGGGAAGTGATTGAAGCTGTGAAGAAGCATTACAGCTTGAAAAAATAA 390 0.4077 MKAFVLRLLPLVFVPLFLSLLLLALMPKETAMRTYEVFGVKIEKNPPQSKLSELGVSTWSKWESGPTKIPWSFKVEETMYLLEGKVKVTVEESVGSFEIGAGDLAVFPKGMNITWEVIEAVKKHYSLKK* 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0819 129 SUPERFAMILY RmlC-like cupins 46 125 IPR011051 -
Apr6g0819 129 Pfam EutQ-like cupin domain 51 125 IPR008579 -
Apr6g0819 129 Gene3D Jelly Rolls 28 127 IPR014710 -
Apr6g0819 129 CDD cupin_TM1112-like 58 127 - -
Apr6g0819 129 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 6 129 - -
Apr6g0819 129 PANTHER OS04G0445200 PROTEIN 6 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0819 Apr-Chr6 12678052 12681355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0819 K06995 - gmx:100807654 202.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0819 6 12678052 12681355 Apr6g0819 6 12678052 12681355 ECH