Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0811 ATGCCCCAAAACGAAACTCACTGCCACCACAATGGTGAAACAACCCTCACCACAAGCTCAACCCCAACACAACACCATCACTGTCCCGTTCTGACCCTTAACCTCAGGGACCCTCAAGACCCCATTTTGGGCACAAATTCAGACACCCTTTGCGCCACAACAATGGCTTCCACCAACTCCACCTCCACCGACCCTCTTCCTTCTTCTTCCTCCGATGACCTCGCCGTTAAAGCCGTTAACAAACGTTACGAGGGTCTCATCACCGTTCGCACCAAAGCGATCAAGGGTAAAGGAGCGTGGTACTGGGCACACTTGGAACCCATTTTGATCCGAAACCCCGACACGGGTTTGCCCAAATCGGTGAAACTCAAGTGTTCTCTCTGTGACTCTGTGTTCTCTGCTTCTAACCCTTCTAGAACCGCTTCTGAGCACTTAAAGAGAGGAACTTGTTCTAATTTCAGTTCCGGTTTGAGACCCGGTTCGGTCCCTTCACCTCTTCCAATTTCCTCTATCACACCCGGTTCGAACCGGAAGAGGGGTTCGCCCCAAATGGGTGTTGCATCACCCACAAGTTATCAAAACCATGCCTTGGCAATGGTGGAGTCTTCAAGGTTTGGTTCTTGTGGTGGGGGTGAAATGGGGTATGGTCAGGTGCATAATAACACGGTGAACCAGCATCATCATCATAATCATCAGTTGGTGTTGTCTGGTGGGAAGGAGGATTTGTGTGCTTTGGCTATGTTTGAGGACAGTGTGAAGAAGCTTAAGAGTCCAAAGACTTCACCTGGTCCTGCTTTAAGTAAGGATCAGGTTAATTCTGCTTTGGATTTGCTTGCTGATTGGTTCTATGAAACTTGTGGGTCTGTGTCTTTGTCTACTCTTGAGCATAGAAAGTTTCAGGCTTTTCTTAGCCAGGTTGGTTTGCCTGCAACTTTGAGGCGTGAGATTTATGGTCCTAGGCTTGATGCTAGGTTTGGTGAGGCCAAAGCTGAGTCCGAAGCTAAGATAAGGGATGCCATGTTTTTTCAGGTGGCAAGTGATGGTTGGAAGAGTAGGAATTGGTATGAGTTGTGTTGTGGTGGTGAGAGTTTGGTTAAGTTTATGGTGAATCTTCCTAATGGGACTAGTGTGTTTCAGAAGGCAGTGTTCACTGGAGGAGTGTTGTCTTCCAAGTATGCGGAAGAGGTTTTGTGGGAGACGGTGACAGGTGTTAGCGGGAATATGGTTCAGAGGTGTGTAGGGATTGTTGCGGACAAGTTTAAGGCCAAGGCATTAAGGAACCTCGAGATTCAGAACCATTGGATGGTAAATACTTCTTGTCAGCTTCAGGGGTTCAATAGTTTAATCAAGGATTTTAACAACGAGCTACCACTTTTCAGGGTTGTGACTGAGAATTGCCTAAAGGTTGCCAATTTTATAGACAGTGAGTCCCAGGTGAGGAATATTTTTCTCAAGTACCGAATGCAGGAGTTGGACTGTGGTGGGTTGATTCGAGTTCCTTCACCAAAATGTGATCCGTTGAAGAACTTTGCGTCTGTGTTTCCAATGCTGGAAGACATTTTGAGCTGTTCTAGAGTAATCCAAATGATTATGTTGGAGGACACGTTTAAGGTAATGTGCATGGAGGATCCAGTGGCCAGAGAAGTCGCTGGAATGGTTCAGAATGAGGGGTTTTGGAATGATCTAGAAGCCGTTTATTCGCTTGTGAAGCTTATCAGAGGAATGGTTCAGGACATTGAGGCCGAGAGGCCATTGATTGGTCGATGCTTGCCTCTTTGGGAAGAGCTGAGAACCAAAGTGAAAGAGTGGTGTGATAAGTACAGTGTTGTGGAAGGGCCTGTGGAGAAAATAGTTGAAAAGCGGTTTAGAAAAAATTATCACCCTGCATGGTCGGCAGCATTTATACTCGATCCACTTTACTTGATTAAAGACACAAGTGGAAAGTATCTTCCTCCGTTCAAGTGTTTGACACGTGAACAAGAGAAAGATGTAGATAAGTTACTGACGAGGCTAGCTTCCCGAGAAGAAGCTCATGTTGTGTTGATGGAGCTAATGAAATGGAGGTCTGAGGGACTTGATCCACTTTATGCACAGGCCGTTCAGATGAAACAAAGGGATCCGGTGACTGGGAAGATGAAAGTCGCAAATCCACTGAGCAGTAGACTTGTTTGGGAAACATGCTTGAGCGAGTTTAAATCCCTGGGGAAGATTGCAGTGAGGCTCATTTTTCTGCATGCAACCTCATGTGGATTTAAGAGTAATTGGTCTTTCATGAGGAAAATTTCTGCAAATAAACACTCAAGAATTGCCTCGGAAAGAGCTCAGAAAATGATATATATTGCAGCTCATGCCAAGCTTGAAAGGAGAGACTTTTCTAGTGAGGAAGAAAAGGACGCAGAGTTGTTTGCAATGTCTGGTAGTGAGGATGGCATGCTGGCTGAGGTCTATGCTGATGCACCCTTAGTTGTTGGAATGGCTTGA 2481 0.4591 MPQNETHCHHNGETTLTTSSTPTQHHHCPVLTLNLRDPQDPILGTNSDTLCATTMASTNSTSTDPLPSSSSDDLAVKAVNKRYEGLITVRTKAIKGKGAWYWAHLEPILIRNPDTGLPKSVKLKCSLCDSVFSASNPSRTASEHLKRGTCSNFSSGLRPGSVPSPLPISSITPGSNRKRGSPQMGVASPTSYQNHALAMVESSRFGSCGGGEMGYGQVHNNTVNQHHHHNHQLVLSGGKEDLCALAMFEDSVKKLKSPKTSPGPALSKDQVNSALDLLADWFYETCGSVSLSTLEHRKFQAFLSQVGLPATLRREIYGPRLDARFGEAKAESEAKIRDAMFFQVASDGWKSRNWYELCCGGESLVKFMVNLPNGTSVFQKAVFTGGVLSSKYAEEVLWETVTGVSGNMVQRCVGIVADKFKAKALRNLEIQNHWMVNTSCQLQGFNSLIKDFNNELPLFRVVTENCLKVANFIDSESQVRNIFLKYRMQELDCGGLIRVPSPKCDPLKNFASVFPMLEDILSCSRVIQMIMLEDTFKVMCMEDPVAREVAGMVQNEGFWNDLEAVYSLVKLIRGMVQDIEAERPLIGRCLPLWEELRTKVKEWCDKYSVVEGPVEKIVEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKCLTREQEKDVDKLLTRLASREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLSEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKISANKHSRIASERAQKMIYIAAHAKLERRDFSSEEEKDAELFAMSGSEDGMLAEVYADAPLVVGMA* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0811 826 SUPERFAMILY Ribonuclease H-like 410 787 IPR012337 -
Apr6g0811 826 MobiDBLite consensus disorder prediction 152 189 - -
Apr6g0811 826 PANTHER OSJNBA0013A04.12 PROTEIN 66 818 - -
Apr6g0811 826 MobiDBLite consensus disorder prediction 1 26 - -
Apr6g0811 826 PANTHER PUTATIVE ISOFORM 1-RELATED 66 818 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0811 Apr-Chr6 12612817 12618241 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0811 - - gmx:100814598 1337.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0811 6 12612817 12618241 Apr6g0811 6 12612817 12618241 ECH
Apr6g0811 6 12612817 12618241 Apr8g1655 8 26730923 26737263 PCT