Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0806 ATGTCTAAACCTCAAAAGGACCCTAAGATGAAAACTGAAATAACTTGTGGATCGCTTCTTCATGAACTTCAGATAATATGGGATGAAGTTGGGGAGTCTGAGACTGACAAACATAGGATGTTGTTTGAGCTTGAACAAGAGTGTCTAGAAGTATACAGAAGAAAGGTTGATAAAGCAAATCAGTCTAGAGCTCAACTAAGGCAGGAAATTGCTGATTCTGAGGCAGAGCTTGCAGCTATCTGTTCAGCAATGGGAGAGCGACCAGTACATGTTAGGCAGTCTGATCAAAAAGCTGAAAGCTTGAAGGAAGAGCTAGCCAGAATTCGCCCAGAGCTGGAGGAAATGCAGAACAGGAAATCTGAGCGTAGAAATCAATTTATAGATGTTCAAGAACAGATTCAAAGTATCTCCCATGAGATTTTTGGTCCAAGAGGATGTATTACAGCCATAGTGGATGAAACTGATTTATCGTTGAGAAAGCTTGAAGAATTGCACAGACAGCTTCTTGCACTTCAAAAAGAGAAGAGTGATCGCCTAAAGAAGGTTCAAGAGCACCTGTGTACTTTAAATTCTCTTTGTTCGGTGCTTGGTTTGGAATTTAAGCAGACAGTCAACGGAGTTCATTCTGGTTTAGGAAATTCAGAAGGATCCAAGAGTGTAAATAATGATACTATCAGTCAATTGGATACTGCTATACAAGAACTGCGGAAAGTTAAATTACAGAGAATGCAGAGGCTACAAGATCTAGCTTCAACAATGTTGGAGCTATGGAATTTGATGGATACGCCTCTAGAAGAGCAACAAATGTTTCAGAATGTTACTTGTAATATAGCTGCTTCAGAACATGAAGTAACTGAACCAAACACCTTGTCTGAGGACTTCATCAATCATGTTGAGGCAGAAGTATCTAGGTTAGAAGAGTTAAAATCAAGCAAAATGAAAGAGCTTGTTTTGAAGAAGAGAGTAGAGCTAGAGGAGATTTGTCAAAAAACTCATTTGGTTCCAGAAATTGATAGTGCAGTGGAATATGCTGTTGAAGCTATAGAGTCTGGATCTGTAGACCCTGCTTGTGTGCTTGAACAAATTGAACTTCAGATTGCTCGAGTTAAGGAGGAAGCCTTTGTCAGAAAAGAAATACTTGAAAAGGTTGAGAAATTGTTGTCAGCATGTGATGAAGAGTCTTGGCTTGAGGAGTACAACAGGGATGAAAATCGGTACAATGCTGGGAGAGGAGCACATCTTATTCTCAAACGAGCTGAGAAAGCCCGCACCTTGGTTAACAAAATGCCAGCAATGGTAGACGCTTTGACTTCAAAAACTGTAGCATGGGAAAAGGATACAGGCATTGAGTTCACATATGATGGTATACGTCTGCTCTCTATGCTTGAAGACTACTCCCTATCACGGCAAGAGAAGGAGCAAGAACGTCGTAGGCAGCGGGACATGAAGAAACTTCAGGGACAATTGATAGCAGAACAGGAAGTACTCTATGGGTCAAAACCAAGCCCTTCAAAGGTCCAGAGTGCAAAAAAGCCACCTAGGATGTCAACTGGAACTGGAAGTGCAGCTAGTAGAAGAGTCTCTGTTGGTGGAGCAATGCTTCAAACCCCAAAACCTGATTCAAAAGCGGCCCAGTCATGCTCCACAAGGAAGACTGACAAAGCACACCAAATTGAGCAACTAAATAACCTGGACGATGGTGTTTCATGTTTATCATCAGCTAGAAGAGGACTTGATATTGCTGGTGTTCGTATGAGAAAATACTCTATTTGTGCTGGAAGTGTTCGTGACATAGAATCTCCTTTGACAAGACAACCTTTTTCTCCCATCTCTTCAACGGTATCATCAAAAGCAAATGTGGCAAATGCTGCACATGAACTGAATATACAGAATGAGAAGTTGCAGAAAATATCGGCCCTCAACAATTTGCCATCCACCACTACTTCAAAGACAGCCACAGTGGTGGATGAAGAGAATAGAACTCCAAAGGAAATACCTATTCCTGTTCCCACAACACCTTTGACAGTGTCAATTCCAATGAATATGTCCATGACTCCAGCTCCTGTGTCAATTCCATATGGAGGTGACTTGGCTCAAGAGATTGAATATTCCTTTGAGGAAAGAAGGCTCGATTTTGTGTTAGCATGA 2148 0.4134 MSKPQKDPKMKTEITCGSLLHELQIIWDEVGESETDKHRMLFELEQECLEVYRRKVDKANQSRAQLRQEIADSEAELAAICSAMGERPVHVRQSDQKAESLKEELARIRPELEEMQNRKSERRNQFIDVQEQIQSISHEIFGPRGCITAIVDETDLSLRKLEELHRQLLALQKEKSDRLKKVQEHLCTLNSLCSVLGLEFKQTVNGVHSGLGNSEGSKSVNNDTISQLDTAIQELRKVKLQRMQRLQDLASTMLELWNLMDTPLEEQQMFQNVTCNIAASEHEVTEPNTLSEDFINHVEAEVSRLEELKSSKMKELVLKKRVELEEICQKTHLVPEIDSAVEYAVEAIESGSVDPACVLEQIELQIARVKEEAFVRKEILEKVEKLLSACDEESWLEEYNRDENRYNAGRGAHLILKRAEKARTLVNKMPAMVDALTSKTVAWEKDTGIEFTYDGIRLLSMLEDYSLSRQEKEQERRRQRDMKKLQGQLIAEQEVLYGSKPSPSKVQSAKKPPRMSTGTGSAASRRVSVGGAMLQTPKPDSKAAQSCSTRKTDKAHQIEQLNNLDDGVSCLSSARRGLDIAGVRMRKYSICAGSVRDIESPLTRQPFSPISSTVSSKANVANAAHELNIQNEKLQKISALNNLPSTTTSKTATVVDEENRTPKEIPIPVPTTPLTVSIPMNMSMTPAPVSIPYGGDLAQEIEYSFEERRLDFVLA* 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0806 715 Coils Coil 98 132 - -
Apr6g0806 715 PANTHER 65-KDA MICROTUBULE-ASSOCIATED-LIKE PROTEIN 9 640 - -
Apr6g0806 715 Gene3D - 365 499 - -
Apr6g0806 715 Coils Coil 49 83 - -
Apr6g0806 715 Coils Coil 295 315 - -
Apr6g0806 715 MobiDBLite consensus disorder prediction 496 526 - -
Apr6g0806 715 Pfam Microtubule associated protein (MAP65/ASE1 family) 18 507 - -
Apr6g0806 715 Coils Coil 161 181 - -
Apr6g0806 715 MobiDBLite consensus disorder prediction 500 524 - -
Apr6g0806 715 PANTHER PROTEIN REGULATOR OF CYTOKINESIS 1 PRC1-RELATED 9 640 IPR007145 GO:0000226|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0806 Apr-Chr6 12556943 12562760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0806 9 549 EF-hand Containing Proteins AT5G62250 55.616 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0806 K16732 - gmx:100777734 1052.74
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0806 6 12556943 12562760 Apr6g0806 6 12556943 12562760 ECH
Apr6g0806 6 12556943 12562760 Apr8g1658 8 26768716 26774095 PCT