LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr6g0804	ATGAGTTTCGCGGCATATAAGATGATGCATTGCCCCACCGGCATCGACAATTGTGCCACCGGCTTCCTCACCCATTCCCGCGCCGATTTCGTTCCTCTTCAGCCCGAAGACCTCGACTCTGAATGGCCCTCTCGTCCCCGCCACACCGGTCCCCTCCCCAACCTCGTCGTCACCGCCGCCAACGTTCTCGAACTTTACATCGTTCGCCTCCAAGAGGAACAGCCTCCTAAGCCCGCTGATTCGCGCCGCGCTGCTCTCCTCGACGGTATTGCCGGCGCGTCGCTCGAGCTTGTTTGCCATTACAGGTTGCATGGTAATGTTGAAACCATGGCTGTGTTGAGCATTGGAGGTGGTGATGGTTCTAGGAAAAGAGATTCTATCATCTTAACTTTTGCAGATGCAAAGATTTCAGTTCTCGAGTACGATGATTCTATTCACGGACTTCGTACTAGTTCTTTGCATTGTTTTGAGGGTCCAGAATGGCTTCATTTGAAAAGAGGAAGAGAACAATTTGCAAGAGGACCGGTGGTAAAGGTTGATCCTCAAGGCAGGTGTGGAGGAGTTCTTATCTATGATTTGCAAATGATAATACTAAAGGCTACTCAGGCTGGTTCTGGTTTAGTTGCGGAGGATGATACCTTGGGTTCTTCAGGTGCAGTTGCTGCTCGTATTGAATCATCTTATATGATAAACCTACGTGACTTGGATATGAGGCATGTAAAAGATTTTATATTTCTTCATGGTTATATTGAACCAGTAATGGTGATTTTGCATGAATGTGAGCTTACTTGGGCTGGGCGTGTCTCGTGGAAGCATCATACTTGTATGATATCAGCACTTAGTATCAGCACAACTTTGAAGCAGCATCCACTTATTTGGTCAGCTGCTAATCTTCCCCATGATTCCTACAAGCTGCTTGCTGTGCCCTCACCGATAGGTGGCGTTCTTGTAATTGGTGCTAACACTATACATTATCATAGTCAGTCTGCTTCTTGTGCATTGGCCTTGAACAACTATTCTGTTTCACTTGATAGTAGTCAGGAGATGCCAAGATCAAGTTTCAGTGTGGAGCTTGATGCTGCCAATGCAACTTGGTTGTTGAGTGATGTGGCCTTGCTGTCAACAAAAACTGGCGAACTGCTATTGCTTACTCTTGTTTATGATGGAAGGATTGTACAGAGACTTGATCTTTCCAAATCAAAAGCTTCAGTTCTGTCATCTGGCATTACAACAATTGGAAATTCTCTGTTTTTTCTCGCCAGTCGATTGGGGGACAGTATGCTAGTGCAATTTTCTTGTGGATCAGGTGTTTCAATGTTGTCATCCAATCTAAAAGAAGAGGTTGGTGATATTGAAGTAGATGCTCCTGCATCAAAGAGATTGCGGAGGTCACCTGATGATGTTTTGCAAGATATGGTTAGCGGTGAGGAACTATCTTTGTATGGATCTGCTCCAAATAGAACAGAATCAGCACAGAAATCCTTCTCGTTTGCAGTGAGAGACTCATTGATTAATGTTGGTCCTTTGAAAGATTTCTCATATGGTTTAAGAATAAATGCTGATGCAAATGCTACAGGGATAGCCAAACAGAGTAACTATGAATTGGTGTGTTGTTCTGGTCATGGAAAGAATGGCTCTCTGTGTGTTCTGCGGCAATCAATTCGCCCAGAAGTGATCACTGAGGTTGAACTTCCTGGTTGCAAAGGAATTTGGACTGTTTATCATAAGAGCACACGCTCTCATAATGCTGATTCTTCTAAGCTGGCTGATGATGATGATGATGAGTATCATGCATACCTTATTATAAGTTTGGAGGCTCGTACTATGGTACTAGAAACAGCTGACCTTCTGAGTGAGGTTACTGAAAGTGTTGACTATTATGTTCAAGGAAAAACACTTGCTGCAGGGAATTTATTTGGAAGGCGTCGAGTTATCCAAGTCTATGAGCGTGGTGCTCGAATTCTAGATGGTTCTTTTATGACCCAAGATGTAAGCTTTGGAGCTTCTAATTCTGAGTCTAGTTCTGCTTCTGAGAGTGCTATAGCACTTTCTGTTTCTATAGCTGATCCATTTGTCTTACTGAGAATGAGTGATGGAAGTATTCGACTTTTGATTGGAGATCCTGGTTCCTGCACCATTTCTGTCACTTCTCCGGCCTCATTTGAGAGTTCCAAGGGATCAGTTTCTTCATGTACACTGTATCATGATAAAGGACCTGAGCCATGGCTAAGGAAGACTAGTACTGATGCATGGCTTTCTACTGGTGTTAGTGAGGCTATTGATGGCACTGATGGTGCAGCTCAGGACCATGGAGATATTTATTGTGTTGTTTGTTATGAAAATGGTGACCTTGAAATATTTGATGTGCCCAATTTCAGTTGTGTTTTTTCTGTGGAAAATTTTATGTCTGGGAAGAGCCACCTTGTTGATGCTCTGATGAAAGAGGTGTCAAAAGATTCTAAAAAAGATGATATAGGTTCTGATGGAGCGGTCAGCCAAGGGAGGAAGGAAAATGTACCCAATATGAAGGTCGTAGAGTTGGCCATGCATAGATGGTCTGGGCAGCATAGCTGTCCATTTCTTTTTGGGATTTTGAGTGATGGAACAATTCTTTGTTACCATGCTTACCTGTATGAAAGTCCTGATGGTACTTCTAAAGTTGAGGATTCAGCATCAGCGGGAGGATCTGTTGGTGTTAGCAGTATCAGTGTTTCCAGGCTTAGAAATTTGAGATTTGTTCGTGTGCCCTTGGATGCATATGCTAGGGAGGAGACATTAAATGGATCCCCTTGTCAACAAATTACTATATTCAAGAATATTGGTAGTTATCAAGGATTCTTTCTATCAGGGTCAAGACCGGCTTGGGCTATGGTGTTGAGGGAACGACTTCGTGTTCATCCACAGCTATGTGATGGGTCTGTTGTTGCTTTTACTGTCCTTCACAACGTGAACTGCAATCATGGACTCATATATGTGACATCTCAGGGTGTTTTAAAGATATGCCAGTTGCCTTCTGGCTCAAACTATGACAGCTACTGGCCTGTACAGAAAATTCCACTAAAAGCCACTCCACATCAAGTAACATACTTTGCCGAAAGGAATTTATATCCACTTATTGTCTCATTTCCTGTTCTTAAGCCACTAAATCAAGTTATTTCTCTGGTTGACCAAGATGTCAACCATCAGAATGATAGTCAGAATTTGAATTCTGATGAGCAAAACCGCTTTTACCCTATTGACGAATTTGAGGTTCGCATTATGGAGCCAGATAAATCTGGTGGCCCCTGGCAAACAAAGGCAACAATTCCTATGCAAAGTTCTGAAAATGCCCTTACTGTGAGGATGGTTACTCTGCTGAATACAACCTCAAAAGAAAATGAAACGCTTTTAGCCATTGGTACTGCTTATGTGCAAGGAGAGGATGTTGCTGCAAGAGGACGTATCCTCTTGTTCTCTTTGGGGAAAAATACTGATAATCCACAAACTCTGGTTTCAGAGGTGTACTCAAAGGAATTAAAAGGTGCTATATCTGCCCTGGCCTCACTTCAGGGCCATTTATTAATAGCATCGGGTCCAAAAATTATTCTGCACAAGTGGAGTGGTACTGAGTTGAATGGTATTGCATTTTTTGATGCACCACCATTACATGTTGTGAGCTTAAATATTGTAAAGAACTTCATCCTCATTGGTGACATCCATAAAAGCATATACTTTCTTAGTTGGAAAGAGCAGGGTGCTCAACTGAGCTTATTAGCCAAGGATTTTGGTTCTCTTGATTGTTTTGCAACAGAATTTTTGATTGATGGAAGTACTCTCAGTCTCATGGTTTCAGATGATAAAAAAAACATCCAGATTTTTTACTATGCACCGAAGATGTCTGAGAGTTGGAAAGGACAGAAGCTTCTTTCAAGAGCTGAATTTCATGTTGGTGCCCATGTGACTAAATTCTTAAGGTTGCAGATGCTATCCACTTCTGATAGAACTGGTGCTGGTCCAGGCTCGGATAAAACCAATCGATTTGCCTTATTATTTGGTACCTTGGATGGCAGTATTGGTTGCATTGCACCTCTTGATGAAATCACTTTTCGCCGACTGCAATCTTTGCAGAGAAAGCTTGTTGATGCTGTACCCCATGTCGCAGGCCTAAACCCAAGAGCTTTCAGACAGTTTCGTTCAAATGGAAAGGCCCATCGGCCTGGCCCTGACAGTATAGTTGACTGTGAGCTGCTATGCCATTATGAAATGCTTCCATTGGAGGAACAGCTTGAAATTGCTCACCAGGTTGGAACAACTCGATCACAAATTCTCTCAAATCTAAGTGATCTGTCTCTTGGAACAAGCTTCTTGTGA	4350	0.4274	MSFAAYKMMHCPTGIDNCATGFLTHSRADFVPLQPEDLDSEWPSRPRHTGPLPNLVVTAANVLELYIVRLQEEQPPKPADSRRAALLDGIAGASLELVCHYRLHGNVETMAVLSIGGGDGSRKRDSIILTFADAKISVLEYDDSIHGLRTSSLHCFEGPEWLHLKRGREQFARGPVVKVDPQGRCGGVLIYDLQMIILKATQAGSGLVAEDDTLGSSGAVAARIESSYMINLRDLDMRHVKDFIFLHGYIEPVMVILHECELTWAGRVSWKHHTCMISALSISTTLKQHPLIWSAANLPHDSYKLLAVPSPIGGVLVIGANTIHYHSQSASCALALNNYSVSLDSSQEMPRSSFSVELDAANATWLLSDVALLSTKTGELLLLTLVYDGRIVQRLDLSKSKASVLSSGITTIGNSLFFLASRLGDSMLVQFSCGSGVSMLSSNLKEEVGDIEVDAPASKRLRRSPDDVLQDMVSGEELSLYGSAPNRTESAQKSFSFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYELVCCSGHGKNGSLCVLRQSIRPEVITEVELPGCKGIWTVYHKSTRSHNADSSKLADDDDDEYHAYLIISLEARTMVLETADLLSEVTESVDYYVQGKTLAAGNLFGRRRVIQVYERGARILDGSFMTQDVSFGASNSESSSASESAIALSVSIADPFVLLRMSDGSIRLLIGDPGSCTISVTSPASFESSKGSVSSCTLYHDKGPEPWLRKTSTDAWLSTGVSEAIDGTDGAAQDHGDIYCVVCYENGDLEIFDVPNFSCVFSVENFMSGKSHLVDALMKEVSKDSKKDDIGSDGAVSQGRKENVPNMKVVELAMHRWSGQHSCPFLFGILSDGTILCYHAYLYESPDGTSKVEDSASAGGSVGVSSISVSRLRNLRFVRVPLDAYAREETLNGSPCQQITIFKNIGSYQGFFLSGSRPAWAMVLRERLRVHPQLCDGSVVAFTVLHNVNCNHGLIYVTSQGVLKICQLPSGSNYDSYWPVQKIPLKATPHQVTYFAERNLYPLIVSFPVLKPLNQVISLVDQDVNHQNDSQNLNSDEQNRFYPIDEFEVRIMEPDKSGGPWQTKATIPMQSSENALTVRMVTLLNTTSKENETLLAIGTAYVQGEDVAARGRILLFSLGKNTDNPQTLVSEVYSKELKGAISALASLQGHLLIASGPKIILHKWSGTELNGIAFFDAPPLHVVSLNIVKNFILIGDIHKSIYFLSWKEQGAQLSLLAKDFGSLDCFATEFLIDGSTLSLMVSDDKKNIQIFYYAPKMSESWKGQKLLSRAEFHVGAHVTKFLRLQMLSTSDRTGAGPGSDKTNRFALLFGTLDGSIGCIAPLDEITFRRLQSLQRKLVDAVPHVAGLNPRAFRQFRSNGKAHRPGPDSIVDCELLCHYEMLPLEEQLEIAHQVGTTRSQILSNLSDLSLGTSFL*	1450

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr6g0804	1449	Pfam	Mono-functional DNA-alkylating methyl methanesulfonate N-term	125	695	IPR018846	-
	Apr6g0804	1449	Gene3D	-	971	1356	IPR015943	GO:0005515
	Apr6g0804	1449	Pfam	CPSF A subunit region	1082	1414	IPR004871	GO:0003676\|GO:0005634
	Apr6g0804	1449	Gene3D	-	50	442	IPR015943	GO:0005515
	Apr6g0804	1449	PANTHER	DNA REPAIR/RNA PROCESSING CPSF FAMILY	2	1440	-	-
	Apr6g0804	1449	PANTHER	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR SUBUNIT 1	2	1440	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr6g0804	K14401		-	gmx:100785543	2658.25

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr6g0804	6	12514230	12543307	Apr6g0804	6	12514230	12543307	ECH