Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0803 ATGGCCCTCGAAACTTGGCTCGTCAAGGTTAAAACGGCGTTGTCGCACAGCTTCGACACCGTGCGACCCTCGAACCCAAAGAACCTTCTTCTTAGGAAACCGTCGTTTTCCTCGTCCAAGCCAAAACGCGTTGCCATCTTGGCCTTCGAGATCGCCGGCGTGATGTCAAAGCTCCTCCACCTCTGGCAATCCCTCTCCGACGCCAACGTCGTTCGTCTGCGAAACGACGCCGTAACCATAGAAGGCGTGTGGAAGCTCATCTCAAACGACGAGTCGTTTCTCTTAAACCTCGCCGTGGCCGAGTTCACGGACTCGCTCCGACTCGCCGCGGACTCGGTCTCCCGACTCAGCCATAAGTGCCACGACTCCACACTCCGATCCTTCCACCGAGTCTTCACCGAGTTCGCCAACTCGGGCCTCGACCCACACGCGTGGACCCTCACGCGCCCCAAAGATATCGAATCGAAGCACAAGAAAATGGAACGTTACGTGACACTCACGCAAACGCTGCATAGAGAAATGGACGAGCTTTCAGTTCTAGAAAGCGCGTTGAGAAAAGCACTTCACAACGGTGACAACATCACCGAACCTTGTTCTCACCAGAAAGCCCATGATCTTCAACAAAAGATTTTCTGGCAGAAACAAGAGGTTCAGAACTTAAAAGAACGATCTTTGTGGAACAAAGGTTTTGATGGGGTTGTTTTGTTGCTTGTTAGGTTCCTTTTCACTGTGTTAGCAAGGATTAAGGTTGTCTTTGGGATTGGACACAGTGTTCCATGCTTATCTCGCAGTTTGTCAGCTTCTGCCACCGTTTATCCCTCTGATCATCAAAACCCTACTTCTCATTCTTGTTCCTTTGTGTCAGGACCATTAAAAAGATCAAAACTTGATGATAATAACGAGGATTCTGGAAGTGGGTTTTTCGAGTCTAATTGCCAGGTGTTGAAGCCACTTCCAAGTACTTTAGGTGCTTCAGCTTTGGCTTTGCACTATGCCAATTTGATCATAGTGATGGAGAAGATGATAAAGTCACCCCAATTGGTTGGAGTTGAAGCCAGGGATGATTTGTATGCCATGTTACCAAGTAGCATAAGATCATCTTTGAGGTCAAGGTTGAAAGGGGTTGGGTTTTCTGCTTGTGATCCTTTGTTGGCTGGAGAGTGGAGAGATGCATTGGGGAGAATACTTGGGTGGTTGTCACCTTTGGCTCATAACATGATCAAGTGGCAGAGTGAAAGGAGCTATGAGCATCAAAATTTGGTTCCAAAAACCAATGTTTTGTTGTTGCAAACTTTGTTCTTTGCAAACAAGGAGAAGACAGAAGCTGCTATAACGGAGCTGCTCGTTGGTTTGAACTATGTTTGGAGGTTTGAGAGGGAAATGACTGCTAAGGCATTGTTTGAATGTACCAAGCTTAATGGGTTGTTAAGTTTGCAAAAGCCCAAATAA 1449 0.472 MALETWLVKVKTALSHSFDTVRPSNPKNLLLRKPSFSSSKPKRVAILAFEIAGVMSKLLHLWQSLSDANVVRLRNDAVTIEGVWKLISNDESFLLNLAVAEFTDSLRLAADSVSRLSHKCHDSTLRSFHRVFTEFANSGLDPHAWTLTRPKDIESKHKKMERYVTLTQTLHREMDELSVLESALRKALHNGDNITEPCSHQKAHDLQQKIFWQKQEVQNLKERSLWNKGFDGVVLLLVRFLFTVLARIKVVFGIGHSVPCLSRSLSASATVYPSDHQNPTSHSCSFVSGPLKRSKLDDNNEDSGSGFFESNCQVLKPLPSTLGASALALHYANLIIVMEKMIKSPQLVGVEARDDLYAMLPSSIRSSLRSRLKGVGFSACDPLLAGEWRDALGRILGWLSPLAHNMIKWQSERSYEHQNLVPKTNVLLLQTLFFANKEKTEAAITELLVGLNYVWRFEREMTAKALFECTKLNGLLSLQKPK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0803 482 Pfam Protein of unknown function (DUF668) 321 408 IPR007700 GO:0045927
Apr6g0803 482 Coils Coil 203 223 - -
Apr6g0803 482 PANTHER BNAC09G50660D PROTEIN 1 481 - -
Apr6g0803 482 Pfam Domain of unknown function (DUF3475) 46 101 IPR021864 GO:0045927
Apr6g0803 482 PANTHER DUF3475 DOMAIN PROTEIN 1 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0803 Apr-Chr6 12499306 12501817 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0803 - - gmx:100801628 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0803 6 12499306 12501817 Apr6g0803 6 12499306 12501817 ECH
Apr6g0803 6 12499306 12501817 Apr8g1660 8 26796835 26798661 PCT