Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0802 ATGACCCAAGCCCGAAAACCCACCAACCCAAAAAACCAAACCCGAGAAAGCCAAAACCCTTCTTCTTCTTCGTCTTTCTCCAATAGCGGCATGAAACTCATCGTTCCCCTTCAAGGTGTCGTTCAAGGCCGTGGTGGCCTCCTTCTCGGTACCCTGGTCCCCTGTGCTCTCTTTTACTTCCTTCAACTCTACCTTAAACGACGTCGGTCCAATTTACCCTCTTCCACCGAACCCAACCTTCCTCGTACCTCTTCCCGCACTAATTTGTCGACCCGTGGATCCATTTCCCGGGTTCAGGTCTCGAGGCTCGCAACCCAGATTGCAAAACCCGAGGATTCTCCCTATTACGTTGGGTTGGATAGGGTTTCGGAGGATTTGTATGATGCAGTGAATAACCCAGATGGGATATTGCAATTGGGTTTGTCGGATAACAAGCTGTGCTTGGATTTGATTGGGGAATGGGTGGAAAGGAACTTGAAGGGATCGGTGATGATGGGGAGTGGTGGCGTTGCTTTGGGTATTAATGGGATTGCGCCTTATCAGCCCTTTGATGGGTTGGAGGAATTGAAAATGGTTTTGTCAGATTTTATGTGTCAGGTGATGGGAGGATCAGTAAAATTTGACCCATCTAATATGGTACTAACGGCTGGAGCAACTCCTGCAATTGAGATACTATCCTTCTGCTTGGCAGACCATGGAAATGCATTCCTTGTCCCTACTCCTTATTATCCAGGCTTTGACAGGGATGTGAGATGGCGTCCGGGGGTACAATTAATACCTGTTCACTGTCGCAGGACTGACAATTTCAATCTAACTATCACTGCTCTACAACAAGCATATAATCAAGCAAGAAAACGAGGTGCCAAAGTTCGTGGAATTTTGATTTCCAATCCTTCAAATCCTGTTGGGAATGTTCTGACGCCAGGCACACTTAACAGTCTTCTAGACTTTGCTGAGGAGAAAAACATTCATATCATTGCTGATGAAGTATTTGCAGGTTCCACATATGGAAGTGAGAAGTTTGTGAGCCTAGCTGAAATTCTCGATTCAGATTGTATAGACAAAAGTCGAGTGCATATAATATATGGCCTGTCAAAAGACCTCTCGCTTGCTGGCTTTAGAGTTGGGGTTATATATTCTTTCAACAACCGGGTTTTGGCTGCTGCAAAGAAGTTGAGTAGATTTTCCTCTATATCTGCTCCGACCCAGAGGTTAGTTAGTTCAATGCTTTCAGATAAAAAATTTATTCAGGACTACTTTGAAGCCAACCGGAGAAGATTAAGAAAAGTGCATGATGAATTCGTGATTTGTTTAAGTAAACTAGGAATTGAGTGTGCCAAAAGCAGTGCTGGTATGTACTGTTGGGCTGATATGAGTGGATTTATCCAACCTTATAGTGAGAAAGGAGAACTTGATTTATGGGAGAAGTTTTTGTGTATTGCTAAGATCAATATAACTCCAGGATCAGCCTGCCATTGCATAGAGCCAGGATGGTTTCGAATCTGTTTTACCACTATAACATTTGAGGAGATACCTCGTGTTATTGAACGGATTAGGCTAGTTGTTGAAAGTTGTAAATCTTCTAGTTGA 1590 0.4371 MTQARKPTNPKNQTRESQNPSSSSSFSNSGMKLIVPLQGVVQGRGGLLLGTLVPCALFYFLQLYLKRRRSNLPSSTEPNLPRTSSRTNLSTRGSISRVQVSRLATQIAKPEDSPYYVGLDRVSEDLYDAVNNPDGILQLGLSDNKLCLDLIGEWVERNLKGSVMMGSGGVALGINGIAPYQPFDGLEELKMVLSDFMCQVMGGSVKFDPSNMVLTAGATPAIEILSFCLADHGNAFLVPTPYYPGFDRDVRWRPGVQLIPVHCRRTDNFNLTITALQQAYNQARKRGAKVRGILISNPSNPVGNVLTPGTLNSLLDFAEEKNIHIIADEVFAGSTYGSEKFVSLAEILDSDCIDKSRVHIIYGLSKDLSLAGFRVGVIYSFNNRVLAAAKKLSRFSSISAPTQRLVSSMLSDKKFIQDYFEANRRRLRKVHDEFVICLSKLGIECAKSSAGMYCWADMSGFIQPYSEKGELDLWEKFLCIAKINITPGSACHCIEPGWFRICFTTITFEEIPRVIERIRLVVESCKSSS* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0802 529 PANTHER AMINOTRANSFERASE ACS12-RELATED 20 526 - -
Apr6g0802 529 Gene3D Aspartate Aminotransferase, domain 1 125 511 IPR015422 GO:0003824
Apr6g0802 529 MobiDBLite consensus disorder prediction 71 91 - -
Apr6g0802 529 PANTHER BIFUNCTIONAL ASPARTATE AMINOTRANSFERASE AND GLUTAMATE/ASPARTATE-PREPHENATE AMINOTRANSFERASE-RELATED 20 526 - -
Apr6g0802 529 Gene3D - 159 412 IPR015421 GO:0003824
Apr6g0802 529 CDD AAT_like 180 519 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 139 165 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 174 190 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 211 231 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 233 254 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 287 311 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 323 346 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 357 381 - -
Apr6g0802 529 PRINTS 1-aminocyclopropane-1-carboxylate synthase signature 389 412 - -
Apr6g0802 529 SUPERFAMILY PLP-dependent transferases 106 522 IPR015424 -
Apr6g0802 529 MobiDBLite consensus disorder prediction 1 28 - -
Apr6g0802 529 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 363 376 IPR004838 GO:0003824|GO:0009058|GO:0030170
Apr6g0802 529 Pfam Aminotransferase class I and II 139 518 IPR004839 GO:0009058|GO:0030170
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0802 Apr-Chr6 12488887 12492804 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0802 K14270 - gmx:100800539 864.759
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0802 6 12488887 12492804 Apr6g0802 6 12488887 12492804 ECH