Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0790 ATGGGGTGGTACAGAAGGGGAAAGCTCGTTCTTGATGGTTTTCGAAGCTTCACTTCGAGGGTTGCGCCTCAAAATCCAAATTTTCAGCGTAATTCGAGGATTTGCCAATCTGGGTATTTGGATTCATGTTCAAAAGGAGCTAGCTTTAATGGGTTTTCTTCGTTTTGTTCAATTTCTCAGAGACTAGGCACACGGGGTGTTGGAGATAACAGGAAATTTCACAATTTGTTTGTTACTGGGGCTAAGAGATTTTACTATGTGGATCCTTACAATGTGCAGCATTTCAGGCCACGAGGGCCAAAGCGTTGGTTTCAGAATCCTCGACACGTGTTCATGGTAGTGGTGATTGGTTCAGGGGTTTTGATCACTGTGTACTTTGGGAATTTGGAAACGGTTCCTTATACCAAGAGAACCCATTTGATTCTGTTGTCAAAAGCAATGGAGAGGAAGCTTGGTGAGAGCCAGTTTGAACAAATGAAGACAGCTTTTAAGGGGAAGATATTGCCTCCTATACATCCTGAGAGTGTGAGGGTGAGGATGATAGCTAGGGAAATCGTTGATGCATTGCAGAGAGGGTTGAGGAAGGAGCAGGTGTGGAGTGATTTGGGGTATGCATCAGAGCATGCTATGGTCGAAGGTGATGGAAGGGAGACATTGAATGCATTGGTTGGGACTGAAGAGAAGGTTGCGGGAAGGTGGCACAAGGAGGATGAGATTCTTGATGACAAATGGGTTCAGCAAAGCAGGAAAAAGGGTCAGGAAAGAGGGTGGCACGATGCTACATCGCATTTGGAAGGGTTGAATTGGGAGGTTTTGGTGGTGAATGAGCCTGTTGTTAATGCCTTCTGCTTACCTGGTGGCAAGATAGTTGTGTTCACTGGTCTGTTAGAGCATTTTAGAAGTGATGCAGAGATAGCTACTATTATTGGACATGAGGTTGGGCATGCTGTGGCAAGACACAGTGCAGAGGGGATTACAAAGAACCTGTGGTTTGCTATTCTACAGTTGATACTTTATCAATTTGTCACTCCTGATATTGTCAACACAATGTCATCCCTTTTCTTGCGGCTACCTTTCTCCAGGCGGATGGAAATGGAAGCTGATTACATTGGGCTGCTGTTAATTGCATCAGCTGGGTATGATCCTCGGGTGGCACCCAAAGTGTATGAGAAGTTGGGAAAAGTGACTGGTGAGTCTGCCCTCAGAGATTACCTCTCTACTCATCCGTCTGGAAGAAAGAGAGCAGAATTGCTTGCTCAAGCTCAGATTATGGAAGAAGCACTTACTCTATACAGGAATGCTAGAACAGGACGTGGGGTTGAAGGATTTCTTTAG 1335 0.4524 MGWYRRGKLVLDGFRSFTSRVAPQNPNFQRNSRICQSGYLDSCSKGASFNGFSSFCSISQRLGTRGVGDNRKFHNLFVTGAKRFYYVDPYNVQHFRPRGPKRWFQNPRHVFMVVVIGSGVLITVYFGNLETVPYTKRTHLILLSKAMERKLGESQFEQMKTAFKGKILPPIHPESVRVRMIAREIVDALQRGLRKEQVWSDLGYASEHAMVEGDGRETLNALVGTEEKVAGRWHKEDEILDDKWVQQSRKKGQERGWHDATSHLEGLNWEVLVVNEPVVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGHAVARHSAEGITKNLWFAILQLILYQFVTPDIVNTMSSLFLRLPFSRRMEMEADYIGLLLIASAGYDPRVAPKVYEKLGKVTGESALRDYLSTHPSGRKRAELLAQAQIMEEALTLYRNARTGRGVEGFL* 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0790 444 Gene3D Metalloproteases ("zincins"), catalytic domain 258 324 - -
Apr6g0790 444 CDD M48C_Oma1_like 266 427 - -
Apr6g0790 444 PANTHER METALLOENDOPEPTIDASE OMA1 82 436 - -
Apr6g0790 444 PANTHER METALLOENDOPEPTIDASE OMA1, MITOCHONDRIAL 82 436 - -
Apr6g0790 444 Pfam Peptidase family M48 264 419 IPR001915 GO:0004222|GO:0006508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0790 K23010 - gmx:100799127 762.681
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0790 6 12357577 12360872 Apr6g0790 6 12357577 12360872 ECH