Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0767 ATGGGTTCTTCAACAAAGAGCATAGCTGATTCAGCATCATGGTTTTGTGCCACGGCACTATTGGGTCTAATTTTATTAGGGTCCATAAGGGAGAGTACTTCTGTGCCTTCAGAGGATGACACCACCGCCGGCGCCGCCGTGAGAGGGCGGAGCCATATCTTTGAACGGCCGTGCGATGAGATATATGTGGTGGGAGAAGGAGAGACCCTTCACACCATAAGTGACAAGTGTGGTGATCCCTTCATTGTTGAACGCAACCCACATATTCATGACCCTGATGATGTGTTCCCTGGCCTCGTCATCAAAATCACACCCACTTATACCAATACTAGGAAATTGTTGAAGAGGTAG 351 0.4843 MGSSTKSIADSASWFCATALLGLILLGSIRESTSVPSEDDTTAGAAVRGRSHIFERPCDEIYVVGEGETLHTISDKCGDPFIVERNPHIHDPDDVFPGLVIKITPTYTNTRKLLKR* 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0767 116 PANTHER LYSM DOMAIN-CONTAINING PROTEIN, PUTATIVE-RELATED 4 114 - -
Apr6g0767 116 Pfam LysM domain 62 103 IPR018392 -
Apr6g0767 116 Gene3D LysM domain 55 112 IPR036779 -
Apr6g0767 116 CDD LysM 61 103 IPR018392 -
Apr6g0767 116 PANTHER EMBRYO SAC 1 4 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0767 Apr-Chr6 11956836 11957337 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0767 - - gmx:106794425 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0767 6 11956836 11957337 Apr6g0767 6 11956836 11957337 ECH