Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0756 ATGTGTCATCCAAGTTCACATGACGTCACCTGCAAATGCAACTCAACTCCTGATTGCCCAATTTCAGCCAAGGACCCAGATGAGCAACCCAACATGCTCACCAACCCATTGATCTCCAAACCCAACACAAACACAACACAAACACAAACACTAATACCACCACCTTATGAACAACGAAAAATAACAACCACCAAAGGTGGTGATTTCATCAAGGAAGTGATTTCCACATCCAAAATAGCCATCCCAATGATCCTCACTGGCCTTTTACTCTATTGCCGCTCCATGATCTCTATGCTTTTTCTTGGCCACCTTGGTGAGTTAGCCTTAGCCGGTGGCTCACTAGCTCTTGGCTTTGCAAACATCACTGGCTACTCAATCCTCTCTGGTCTTGCAGTTGGAATGGAACCCATTTGTGGACAAGCTTTTGGTGCCAAAAGGTTCACACTTCTTGGCCTAACCTTGCAAAGAACCATTCTTTTGCTTCTTTTCACTTCCATACCCATATCACTCCTTTGGCTTCACATGAAGCAAATTCTTCTCTTTTGTGGCCAGGATCAAGCTATAGCCACACAGGCCCAATCATATCTTCTTTACTCCATTCCTGATCTCATAGCACAATCACTTTTGCATCCTTTGAGAATTTACCTTAGGACTCAATCCATTACTCTGCCTCTTACCCTTTGTGCCACTTTTTCAATTTTGCTTCACATACCCATAAACTATTTTCTTGTTTCTCACCTTAGGCTTGGGATTAAAGGGGTGGCTCTTAGTGGGGTGTGGACAAATTTCAACCTTGTGGCTTCTTTGATTCTTTATATTGTTTTCTCTGGCACTCATAGGAGAACATGGGGCGGTTTCTCTCTTGAGTGCTTCACACAGTGGAAGTCTCTTCTCAATTTGGCCATTCCAAGTTGCATTTCTGTGTGCTTGGAATGGTGGTGGTATGAGATCATGATTTTGCTTTGTGGGTTGTTGGTGAATCCCAAAGCAACCGTTGCTTCAATGGGAATTTTGATCCAAACCACTTCGTTGCTCTACATTTTCCCTTCTTCATTGAGCTTCAGTGTTTCAACTAGAGTTGGCAACAAGTTAGGTGCACAAAAGCCCTCAAAGGCAAGGCTTTCTGCCATTGTGGGCTTGTCTTGCAGCTTCATTTCAGGTGTCTCAGCACTTATTTTTGCTCTTTTGGTTAGGAACATATGGGCTAGCATGTTCACCAAAGACAAGGAGATTATAACACTTACATCTATGGTGTTACCTATAATAGGCCTTTGTGAGCTTGGAAATTGCCCTCAGACAACAGGTTGTGGAGTGCTGAGAGGCACAGCAAGGCCTAAAGTTGGTGCTAACATCAACTTGGGATGCTTCTACCTTGTGGGAATGCCTGTGTCCATTTGGCTTGCTTTTTTCGCTGACTATGATTTTCAAGGCCTTTGGCTTGGCCTGCTTGCAGCTCAAGGGTCTTGTGCAGTGACCATGTTGGTGGTTCTGGTTAGAACAGATTGGGATTTTGAGGCTCAAAGGGCTAATAAACTCACAGGAACAGGAGTAGCTGGTGGTGTTGATCATAATCATGAGGTCGATGAAGAAAAGCCACTCAAACGTGAAAGCAAGGAAGATTCTTTATCATTAGCTACTTCAGCTGGAGATGAACAGTGCTTGGTTTAA 1668 0.4382 MCHPSSHDVTCKCNSTPDCPISAKDPDEQPNMLTNPLISKPNTNTTQTQTLIPPPYEQRKITTTKGGDFIKEVISTSKIAIPMILTGLLLYCRSMISMLFLGHLGELALAGGSLALGFANITGYSILSGLAVGMEPICGQAFGAKRFTLLGLTLQRTILLLLFTSIPISLLWLHMKQILLFCGQDQAIATQAQSYLLYSIPDLIAQSLLHPLRIYLRTQSITLPLTLCATFSILLHIPINYFLVSHLRLGIKGVALSGVWTNFNLVASLILYIVFSGTHRRTWGGFSLECFTQWKSLLNLAIPSCISVCLEWWWYEIMILLCGLLVNPKATVASMGILIQTTSLLYIFPSSLSFSVSTRVGNKLGAQKPSKARLSAIVGLSCSFISGVSALIFALLVRNIWASMFTKDKEIITLTSMVLPIIGLCELGNCPQTTGCGVLRGTARPKVGANINLGCFYLVGMPVSIWLAFFADYDFQGLWLGLLAAQGSCAVTMLVVLVRTDWDFEAQRANKLTGTGVAGGVDHNHEVDEEKPLKRESKEDSLSLATSAGDEQCLV* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0756 555 MobiDBLite consensus disorder prediction 28 49 - -
Apr6g0756 555 PANTHER MULTIDRUG RESISTANCE PROTEIN 58 526 - -
Apr6g0756 555 MobiDBLite consensus disorder prediction 23 49 - -
Apr6g0756 555 MobiDBLite consensus disorder prediction 522 541 - -
Apr6g0756 555 Pfam MatE 82 242 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr6g0756 555 Pfam MatE 303 465 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Apr6g0756 555 CDD MATE_eukaryotic 72 508 IPR045069 GO:0042910|GO:1990961
Apr6g0756 555 MobiDBLite consensus disorder prediction 515 541 - -
Apr6g0756 555 PANTHER PROTEIN DETOXIFICATION 58 526 - -
Apr6g0756 555 TIGRFAM matE: MATE efflux family protein 82 479 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0756 Apr-Chr6 11780246 11781913 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0756 K03327 - gmx:100788027 863.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0756 6 11780246 11781913 Apr6g0756 6 11780246 11781913 ECH