Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0738 ATGTCAAGGAGAGATCTAGAAAGTGGAGGGGTAAGCAAGAACAACAGAGCAGTGGCCAACAACTATTCTGCTGCTCCTACTTCCTATGTTTATGATCCGGATATTCATTGGACATCGTGGCTTGTGCCTCTTTTTGTGGCGGTTAATGTTGTGGTTTTCATTGTGGCTATGTATGTTAACAATTGTCCCAGGAAAAATCTTGGGATTGAAGGTGATTGTGTGGCTAGGTTTCTGGGCAGGTTTTCCTTCCAGCCTCTTCGGGAAAACCCATTGTTTGGACCCTCTTCCTCAACTTTAACAAAGATGGGAGCACTTCAGTGGGATGATGTTGTGAATCATCATCAAGGATGGAGGCTTGTCACTTGCATATGGTTACATGCTGGAGTTGTGCATTTGGCAGCGAACATGTTGAGTCTGGTCTTCATTGGCATTCGCCTTGAACAACAGTTTGGGTTTGTGAGAATAGGAATCATTTACCTGTTGTCTGGATTTGGTGGAAGCGTATTGTCTTCTCTATTTATTAGAAACAACATCTCAGTTGGTGCTTCTGGTGCACTTTTTGGACTTCTTGGAGCAATGCTTTCAGAACTTATCACAAACTGGAGTATTTATACCAATAAGGCTGCTGCTTTGTTCACACTTCTGCTTATTATTGTCATCAATCTTGCCATTGGAATGTTGCCACATGTTGATAACTTTGCACATATTGGTGGATTCCTCACAGGATTTCTCCTTGGTTTTATTTTGCTGCTCCGTCCTCAATTTGGGTGGTTAGAGCAGCGACACCTCCCTACCGGGGTTCGCCTCAAATCAAAATTCAAGGTTTACCAATATGTGCTATGGATTGTCTCCAGTATTTTATTGATTGTTGGGTTATCTGTTGCTCTAGTGATGCTATTCCGGGGTGAGAGTGGATATGATCACTGCCATTGGTGTCACTACCTAACGTGCGTTCCAACTTCTAAATGGAAATGCAATGACAATTGA 987 0.4276 MSRRDLESGGVSKNNRAVANNYSAAPTSYVYDPDIHWTSWLVPLFVAVNVVVFIVAMYVNNCPRKNLGIEGDCVARFLGRFSFQPLRENPLFGPSSSTLTKMGALQWDDVVNHHQGWRLVTCIWLHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLLLIIVINLAIGMLPHVDNFAHIGGFLTGFLLGFILLLRPQFGWLEQRHLPTGVRLKSKFKVYQYVLWIVSSILLIVGLSVALVMLFRGESGYDHCHWCHYLTCVPTSKWKCNDN* 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0738 328 Gene3D - 35 252 IPR035952 -
Apr6g0738 328 PANTHER RHOMBOID-RELATED 1 328 IPR002610 GO:0004252|GO:0006508|GO:0016021
Apr6g0738 328 Pfam Rhomboid family 112 253 IPR022764 GO:0004252|GO:0016021
Apr6g0738 328 SUPERFAMILY Rhomboid-like 36 254 IPR035952 -
Apr6g0738 328 PANTHER RHOMBOID-LIKE PROTEIN 3 1 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0738 Apr-Chr6 11539906 11543652 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0738 - - gmx:100813345 562.762
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0738 6 11539906 11543652 Apr6g0738 6 11539906 11543652 ECH