Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0736 ATGCGAGTCTTGGCTTTTCGAAGCTCCAATCTAATAAAGCACAATCTCGAGAATTTCCCATTGATTCACCTTCACCTCAACTTCAATCTCAATTCTACACGACCAATGTCGCAATCCACCGCAATCCCCAAAAAGCAACAAAGAGTTCGCGACCATGGCTACGACAACTACATGGAGGTTGAGAAGAAAACCCGCAAGGTACTCAAATTCCAGAACCTAATCCTCTCCGAGCCCAACCAATCACTTCCAATCTCGCGCCTCGAAACCCTAGCGCGCCGCATCGGCTTCACGCGCCACGAAGCCGGCGCGTTCATTCTCAAGTTCCCGCATGTGTTCGAAATCTTTGAGCACCCGGTTCAACGCATCCTCTTCTGCCGTTTAACGCGCAAGGCCATCCTCCAGATCGAACAGGAACGCCACGCGCTCGCATCGCTGGTTCCACTCGCTGTCACGCGGCTCCGGAAGCTTCTCATGATGTCGAACGACCTCCGACTACGCCTTGAGCACGTGAGGATCGCACGCGCCGCGTTGGGGTTACCGGATGATTTCGAATTCTCGGTGGTTCTGAGGTACCCTCAATTTTTTCGCTTGATTGATGCAAATGAAACTAGGAATAAGTACATTGAGCTTGTGGAGAGGGACCCTAGGTTAACAATTTGTGCAATTGAGGAGGTTAGGGAGAGGGTGTATAGAGAGAAAGGTGGTGATGCTGAAGATGTTAGGTTTTCTTTTGTGATTGATTTTCCGCCTGGTTTCAAGATTGGTAAGTATTTTAGAATTGCAATGTGGAAGTGGCAGAGGGTCCCATATTGGTCCCCTTATGAGAATGTTTCTGGGTATGATTTGAGGTCCATTGAGGCCCAGAAGAGAATGGATAAGAGGGCTGTTGCCACCATTCATGAATTGTTGTCCTTGACTGTGGAGAAGAAGATTACTCTGGAGAGGATTGCTCATTTCCGAATGGCGATGAACCTACCCAAGAAGTTGAAGGATTTCCTGCTTCAGCATCAAGGAATTTTTTATGTTTCCACTAGGGGGAATCAGGGTAAACTTCACACTGTTTTCCTTAGGGAGGCATATAGGAAGGGCGAGCTGATTGAGCCTAATGACTTGTATTTGGCACGTAGGAAGCTGGCTGAGCTGGTCTTGTTGAGTCCCCGGAAAGCCAAGGTTGATAGGGAATTGGTTGGTTACAGAAGAAGCAGGTTAGATGATGAAATGGGGCAAGTAACAAGAGCATATGTGGAGGATGCTTGTGAAGACTTCAAGGTTGAAGATGGTGGGGTGCTAGATAAGGATGCAGTGGATGATTTGACATCAGATATAGGTTCTGATGTTGATTCTGGAGATGAGGATGATGATGATGTTGAGGATAGTAGTGTATCATTGCAAAGGACATCTTAG 1404 0.4744 MRVLAFRSSNLIKHNLENFPLIHLHLNFNLNSTRPMSQSTAIPKKQQRVRDHGYDNYMEVEKKTRKVLKFQNLILSEPNQSLPISRLETLARRIGFTRHEAGAFILKFPHVFEIFEHPVQRILFCRLTRKAILQIEQERHALASLVPLAVTRLRKLLMMSNDLRLRLEHVRIARAALGLPDDFEFSVVLRYPQFFRLIDANETRNKYIELVERDPRLTICAIEEVRERVYREKGGDAEDVRFSFVIDFPPGFKIGKYFRIAMWKWQRVPYWSPYENVSGYDLRSIEAQKRMDKRAVATIHELLSLTVEKKITLERIAHFRMAMNLPKKLKDFLLQHQGIFYVSTRGNQGKLHTVFLREAYRKGELIEPNDLYLARRKLAELVLLSPRKAKVDRELVGYRRSRLDDEMGQVTRAYVEDACEDFKVEDGGVLDKDAVDDLTSDIGSDVDSGDEDDDDVEDSSVSLQRTS* 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0736 467 Pfam Plant organelle RNA recognition domain 49 385 IPR021099 GO:0003723
Apr6g0736 467 MobiDBLite consensus disorder prediction 443 458 - -
Apr6g0736 467 MobiDBLite consensus disorder prediction 434 467 - -
Apr6g0736 467 PANTHER PROTEIN ROOT PRIMORDIUM DEFECTIVE 1 25 442 IPR040295 -
Apr6g0736 467 PANTHER PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTIC 25 442 IPR045040 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0736 Apr-Chr6 11475611 11490851 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0736 - - gmx:100782167 761.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0736 6 11475611 11490851 Apr6g0736 6 11475611 11490851 ECH