Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0712 ATGGGTGGTCCAGGGAGGTGGCAAATCAATGGAGACATAGGGGAAGGAGTGTGCCTCAAAATTGGGGAGCGCAAGACCAAGCCACGCTTTTGCCATATACCACGCAATATGATAGAAGTGAGAGTTCCAAATCTTGATTGTGAGGGATGTGCTTCAAAGTTAAAGAGAGCACTCTTCAAGCTCAAAGGAGTAGATGAAGTAGAGGTTGAAATGGAGGCACAAAAAATAACAGTGAGAGGGTATGGTTTGGAGGAGAAGAAGGTTCTTAAAGCAATAAAACGTGCAGGGAAGGCAGCAGAGCCATGGCCATTTCCAGGGCATGCCCATTTTGCTTCATTTTACAAGTACCCAAGTTACATTGTTAACCATTATTATGATGCATACAAAAGTGAAGCAACAAATGGAGTCCACACTTTTTTCCACACCCCTTCTGTCTATTCAGTTGCTGTGGCATCTGATGAGGCCTTTGCTTCACTCTTTAGTGATGATAACCCTCATGCTTGCACTATAATGTAA 516 0.436 MGGPGRWQINGDIGEGVCLKIGERKTKPRFCHIPRNMIEVRVPNLDCEGCASKLKRALFKLKGVDEVEVEMEAQKITVRGYGLEEKKVLKAIKRAGKAAEPWPFPGHAHFASFYKYPSYIVNHYYDAYKSEATNGVHTFFHTPSVYSVAVASDEAFASLFSDDNPHACTIM* 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0712 171 SUPERFAMILY HMA, heavy metal-associated domain 37 103 IPR036163 GO:0046872
Apr6g0712 171 ProSiteProfiles Heavy-metal-associated domain profile. 37 101 IPR006121 GO:0046872
Apr6g0712 171 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 31 36 171 - -
Apr6g0712 171 CDD HMA 39 100 IPR006121 GO:0046872
Apr6g0712 171 Gene3D - 35 100 - -
Apr6g0712 171 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 36 171 IPR045181 GO:0046872
Apr6g0712 171 Pfam Heavy-metal-associated domain 40 97 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0712 Apr-Chr6 11115546 11117090 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0712 - - aprc:113866662 360.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0712 6 11115546 11117090 Apr6g0712 6 11115546 11117090 ECH