Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0704 ATGAATTCCTCCATTGTTAGCCTTATGTGTCTTGCCTTGTTGACGTTTCTTGTAGTAATTTGCAAGGCATCGAGAGATGTAGTGTGCATACCAAACGAGAGTGAAACACTTGTGAAGTTGAAGGATCATCTCATTGATCCTTCAAATAGGCTCTCTTCTTGGAATGCAACTGCTAATACCAATTGCTGTGAGTGGTTAGGAGTTGTGTGCAGTAATATAACTGCCCATGTTGTTGAGCTTCACCTCGGTACTTCACCTCCTTCTGACGAGTACGACGATGTCGAATATGATGCTTTTCTGAAGTCGATGTTTGGTGGGGAGATAAATCCATGTTTGGTTGATTTGAAGCATTTGAATTACTTGGACTTAAGCGGCAATGACTTTGGCGGTATGCAAATTCCTGCTTTCCTTGGAGCAATCACCTCCCTAACTTACCTCAACCTCTCTCATGCCGGATTCAGTGGGAAGATTCCTCCTCAATTTGGGAACCTCACAAAATTGGTTCGTCTTGGCCTTGCAAACAGTGAAACTGTGTTTGCTGAAAATCTTGATTGGCTATCGGGTCTTTCCAATCTTCAGTATGTTGATTTGGGAGGTGCAAACCTATCCCAATCCTTTGATTGGCTACAAACTCTGAGTGCTCTTCCTTCTTTGACGGACCTACACTTGTCATATTGTATTGTCCATCCTTATAATCAACCATCCTCACTCAACTTTTCATCTCTTCTCACTCTCGACCTTTCCTTTACTCATTTTTCTTCTGTTGTCCCAAAGTGGATATTTGGACTGAGGAGACTTGTTTCTCTTCGATTAAGTGGTAATCACTTCGAAGGTCCAATTCCTGATGGCCTTCAAAACCTCACACTTCTTGAAAATCTTGACTTGTATTACAATTCATTCTCAACTTCTTTACCTGAATGGATATATAGTTTTCGTCATCTCAAGTTCTTAGACCTTTCGAACAACAACTTGTGTGGAAATATTTCTGATGCCCTGGGAAATTTGACTTCTCTGGTTGCACTTTATTTCTCTGCAAATCAGATTGAAGGAAGAATTCCAACTTCTTTGGGTAATCTCTGCAACATAAGGGAAATGTTAAACTTTTACAACAATTCAATTCATGGTGCACTCCCTCCATCAGTTAGAAAACTCTCGTCATTAAGGGTTCTTGATCTGTCCAACAATCTATTCAATGGAAATCCATTTGAAAGTCTTGGATCGATCTCTAAATTGTCATATCTTTCTATTGGCGACAATTGTTTTCAAGGAGTTGTGAAGGAAGATGATCTTGCAAATCTTACGAACTTAAAGAGATTTTCTGCGAGAGGGAACAACTTCTCTTTAGAAGTGACTCCTAATTGGAGTCCTAGATTTCAAGTTACTAGATTGACAATGAGCTCATGGAACTTAGGTCCCAAATTTCCGTCGTGGATTCAGTCACAAAAATATCTTAATGCTCTGAGAATCTCTAACACAGGGATTTCAGATTCTATTCCCACTTGGTTTTGGGAAACATTTTCTCAGGCGTCTGATATGGACCTCTCTCATAATAGCATCCATGGTGAGCTTCCAAATACATTGGATCTAAGCTCAAATCGCTCACGTGGCCAACTGCCTCAACTTTTTGATAAAATGATTCACTTAGACCTATCACACAACTTGTTCTCCGGATCCATGACTGAATTCCTTTGCAAAAATCATGACAAGCCAAAGAAATTAGAATTTCTCAACCTTGCATCAAATAATTTATCAAGGGAAATTCCTGATTGTTGGCTAATGTGGCCATATCTTGTGAATGTAAATTTACAAAGCAACCATTTTATTGGGAATTTACCCTCGTCTATGGGCTCTTTATCGTTGCTTCAGTCTTTGCAACTCCGCAACAACACACTTTCTGGAAATTTTCCCCTGATTTTAAGGAACACTACTAAGTTAATATTGTTGGACCTTGGGGAAAATAATTTTTCAGGAAACATTCCAGCATGGATAGGAGAAAGACTTATAGATTTGAAATTTCTTCGGCTTCGATCAAACAAATTTTTGAGTTACATTCCCAATCAAATATGTGCTTTGAAATCTCTTCAGGTTTTGGACCTTGCAAACAATAGTTTATCGGGCAATATCCCAAATTGTTTCAATCACTTGAATGCCATGATGCTGCCAAACAGAAGTACACATCCATTTATCTATTGTTTATCAGTAAACAGTTCTGGAATTAGTGTTGTGAGCATGCTTCTGTGGCTGAAAGGAAGGGGAGACGAGTATAGAAACATTCTTGGTTTGGTAACAAGCATTGATCTCTCAGATAACAAATTAATAGGAGAAATTCCTAGAGAAATCACAAATCTAGATGGATTGAATTTTTTGAACTTGTCTCACAATCAATTAACTGGTCATATTCCACAAAGCATTGGTTGCATGCGTTCATTGCAATCTATTGATTTTTCGAGGAATCAACTTTCTGGTGAAATCCCCACAACCATATCAAATTTGAGCTTTATTAGCTTGCTGAACTTGTCTTATAATCATTTGAAGGGCAAAATACCAACAGGCACTCAGTTGCAATCCCTTGAGGCATCCAACTTTGTTGGCAATAACCTATGTGGCGAGCCGTTGCCCATCAACTGCAGTTCAAATGGGAAAATTCCTAATATTGATCAAAATGGCAATGAGAGTGAAGGACATGAAGTGAATTGGTTTTTAGTGAGTATGACATTTGGATTTATGGTGGGATTCTGGGCTGTGGTTGCTCCTTCATTCATTTATAAATCATGGAGCTCTGTCTATTTTTGTATTATTAATTATGTGTGGTCTAAACTAAAATCTTTTCAGTAA 2835 0.3848 MNSSIVSLMCLALLTFLVVICKASRDVVCIPNESETLVKLKDHLIDPSNRLSSWNATANTNCCEWLGVVCSNITAHVVELHLGTSPPSDEYDDVEYDAFLKSMFGGEINPCLVDLKHLNYLDLSGNDFGGMQIPAFLGAITSLTYLNLSHAGFSGKIPPQFGNLTKLVRLGLANSETVFAENLDWLSGLSNLQYVDLGGANLSQSFDWLQTLSALPSLTDLHLSYCIVHPYNQPSSLNFSSLLTLDLSFTHFSSVVPKWIFGLRRLVSLRLSGNHFEGPIPDGLQNLTLLENLDLYYNSFSTSLPEWIYSFRHLKFLDLSNNNLCGNISDALGNLTSLVALYFSANQIEGRIPTSLGNLCNIREMLNFYNNSIHGALPPSVRKLSSLRVLDLSNNLFNGNPFESLGSISKLSYLSIGDNCFQGVVKEDDLANLTNLKRFSARGNNFSLEVTPNWSPRFQVTRLTMSSWNLGPKFPSWIQSQKYLNALRISNTGISDSIPTWFWETFSQASDMDLSHNSIHGELPNTLDLSSNRSRGQLPQLFDKMIHLDLSHNLFSGSMTEFLCKNHDKPKKLEFLNLASNNLSREIPDCWLMWPYLVNVNLQSNHFIGNLPSSMGSLSLLQSLQLRNNTLSGNFPLILRNTTKLILLDLGENNFSGNIPAWIGERLIDLKFLRLRSNKFLSYIPNQICALKSLQVLDLANNSLSGNIPNCFNHLNAMMLPNRSTHPFIYCLSVNSSGISVVSMLLWLKGRGDEYRNILGLVTSIDLSDNKLIGEIPREITNLDGLNFLNLSHNQLTGHIPQSIGCMRSLQSIDFSRNQLSGEIPTTISNLSFISLLNLSYNHLKGKIPTGTQLQSLEASNFVGNNLCGEPLPINCSSNGKIPNIDQNGNESEGHEVNWFLVSMTFGFMVGFWAVVAPSFIYKSWSSVYFCIINYVWSKLKSFQ* 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0704 944 Pfam Leucine rich repeat 216 276 IPR001611 GO:0005515
Apr6g0704 944 Pfam Leucine rich repeat 762 820 IPR001611 GO:0005515
Apr6g0704 944 SUPERFAMILY RNI-like 106 450 - -
Apr6g0704 944 SUPERFAMILY L domain-like 564 875 - -
Apr6g0704 944 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Apr6g0704 944 Gene3D Ribonuclease Inhibitor 211 304 IPR032675 -
Apr6g0704 944 Gene3D Ribonuclease Inhibitor 305 401 IPR032675 -
Apr6g0704 944 PRINTS Leucine-rich repeat signature 314 327 - -
Apr6g0704 944 PRINTS Leucine-rich repeat signature 691 704 - -
Apr6g0704 944 Pfam Leucine Rich Repeat 693 715 IPR001611 GO:0005515
Apr6g0704 944 PANTHER LEUCINE-RICH RECEPTOR-LIKE KINASE FAMILY PROTEIN 138 937 - -
Apr6g0704 944 SUPERFAMILY L domain-like 459 617 - -
Apr6g0704 944 PANTHER LRR RECEPTOR-LIKE KINASE 138 937 - -
Apr6g0704 944 Gene3D Ribonuclease Inhibitor 30 210 IPR032675 -
Apr6g0704 944 Gene3D Ribonuclease Inhibitor 402 879 IPR032675 -
Apr6g0704 944 SMART LRR_typ_2 239 262 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 807 831 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 115 138 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 335 359 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 384 407 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 783 806 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 287 311 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 263 286 IPR003591 -
Apr6g0704 944 SMART LRR_typ_2 691 714 IPR003591 -
Apr6g0704 944 SMART LRR_sd22_2 335 361 - -
Apr6g0704 944 SMART LRR_sd22_2 384 410 - -
Apr6g0704 944 SMART LRR_sd22_2 759 785 - -
Apr6g0704 944 SMART LRR_sd22_2 807 833 - -
Apr6g0704 944 SMART LRR_sd22_2 691 710 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0704 Apr-Chr6 10903231 10906221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0704 6 883 Receptor kinase-like Gene Family AT2G15080 29.436 5.14e-91 309
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0704 - - aprc:113866653 1530.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0704 6 10903231 10906221 Apr6g0704 6 10903231 10906221 ECH