Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0689 ATGGCTTCTCTCTCCCTTCTTCTCACCTTGTTGCTGTTCTCCGTAATTGGCACTTCTTCTTCGGATAGGAAGGAATTAAGGAACAAGCAGGAAACTGAATTGCAGCTGTTAGAGCACTCATTTCATTATTCCAACCGAATTGACCCATCACGTGTTGTCCAAATTTCTTGGCAACCAAGGGTCTTTCTATACAGAGGTTTTTTGTCAGACAGGGAGTGTGACTACCTTATTTCTTTGGCATATGCCTTGAAGGAAAAATCATCAGGGAATAATGGCCTTTCAGAGGCGGTTGAAACCCCCTTGGATGTAGAAGATGATATCGTCGCAAGGATTGAAGAAAGACTTTCACTTTGGACTTTCCTTCCTAAAGAGAACAGCAAACCTTTGCAGGTTATGCATTATGGACTTGAGCAGGAGGGTCGTAACTTAAATTATTTTACAAACAAAACCAAATTGGAATCAAGTGGATCTTTAATGGCAACAGTTGTTTTATATCTCTCAAATGCCACTCAAGGGGGTCAAATTCTCTTTCCCGAGTCAGTGCCCAAGAGTAGCACCTGGTCAAATTGTAGAAATAGTACTAACATTCTCCAACCAGTAAAAGGGAACGCAATTCTGTTCTTCTCTCTTCACCCAAGTGCATCTCCAGACAAGAGTAGCTTCCATGCTAGATGCCCTGTCCTTAAGGGGGATATATGGTCTGCAATCAAATACATCTATGCAAAATCAGTTAGTAGAGGGAAGGTCTCAAACATATCTGATGGTGGTGAATGTACTGATGAGGATGATAGTTGTCCCACTTGGGCAGCCATGGGAGAATGCCAACGAAATCCTGTGTTCATGATTGGGTCTCCAGATTATTATGGTACGTGTCGGAAAAGTTGTAATGCATGCTGA 897 0.4225 MASLSLLLTLLLFSVIGTSSSDRKELRNKQETELQLLEHSFHYSNRIDPSRVVQISWQPRVFLYRGFLSDRECDYLISLAYALKEKSSGNNGLSEAVETPLDVEDDIVARIEERLSLWTFLPKENSKPLQVMHYGLEQEGRNLNYFTNKTKLESSGSLMATVVLYLSNATQGGQILFPESVPKSSTWSNCRNSTNILQPVKGNAILFFSLHPSASPDKSSFHARCPVLKGDIWSAIKYIYAKSVSRGKVSNISDGGECTDEDDSCPTWAAMGECQRNPVFMIGSPDYYGTCRKSCNAC* 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0689 298 Pfam 2OG-Fe(II) oxygenase superfamily 151 240 IPR044862 -
Apr6g0689 298 PANTHER PROLYL 4-HYDROXYLASE ALPHA SUBUNIT 4 298 IPR045054 -
Apr6g0689 298 SMART ShkT_1 257 298 IPR003582 -
Apr6g0689 298 SMART p4hc 59 240 IPR006620 GO:0005506|GO:0016705|GO:0031418
Apr6g0689 298 Gene3D q2cbj1_9rhob like domain 51 240 - -
Apr6g0689 298 ProSiteProfiles ShKT domain profile. 258 298 IPR003582 -
Apr6g0689 298 PANTHER PROLYL 4-HYDROXYLASE 12-RELATED 4 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0689 Apr-Chr6 10521892 10526712 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0689 K00472 - gmx:100795761 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0689 6 10521892 10526712 Apr6g0689 6 10521892 10526712 ECH