Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0685 ATGTCTGATGCTGCTATGGCAATTGTGAAACCAGAGATGAAATCGTACATCTGGCTTCAAACTGTTGATGGTTCTATTCAGCAAGTAGAGGAAGAGGTAGCCATGTTTTGCCCCATGATTTGCCAGGAAGTACTTCAGACAGGCATGGGATCTTCCAAAACATATGCTATATCTCTTCCACAACGTGTCAATCCTGCAAGCTTGGGTTTAATACTTGATTACTGTCAGTTTCACCAAGTACCAGGACGATCTAATAAGGAGCACAAAACTTTTGACGAACAGTTTATTAGGATGGATACAAAGAAGTTATGTGAGTTGACATCTGCTGCTGACAGCCTCCAACTGAAGCCTTTGGTTGATCTGACAAGCCGAGCCCTTGCTCGGATTATTGAAGGAAAAACCCCTGAGGAGATTCGTGAAACATTTCATTTGCCTGATGACCTCACTGAGGAGGAGAAGCTGGAGCCTCTCAGAAACATAGCCGATGATCCACGAATTCGACTTCTAAACAGATTATATGCTAGAAAGAGGAAAGAACTAAAAGAGAGGAAGAAACTGAAGGATGTTGAGGCTGAGGAACCAAAAGATGAGCGCTCAGTTGAAGATCTTCTAACATTTATAAATGGTGCAGATAGAGATGTAAAGGGAACTAGAGCAAATAAAAATAAAAAGAAGAATAGGAGAAGGAAAGACCATGCAAAGGATCTTTCTTCAAAAAATGCAAATGAAAATGATAATAAGGAGTTGAATCCACTTCCTTCTGCATATCACAATGGCAATTTTGACAATTCCTTAGAATGCTCTGCAAATAAACACTCAAGGATGCAAGATCTTTCAGCTGTTAATTTTTCTCCAATGTTTGAGTTTATTGATGGTGATCTTGATGATGATTTAGATCCTGCAATGAAGGAGGAGCTTGACAGGGAAGTGGAAGATTTTGCACGAAGATTAAATTCAGTTTGGCCTGAAAGAATGCAAATTTTATCTTCGACCCAAGACAGAAGACTAGTACCAATTTCTATGAATAGCAATGGTTCAATGCCCTTGTATACAAGTTTTGACCAGAGATAG 1071 0.3959 MSDAAMAIVKPEMKSYIWLQTVDGSIQQVEEEVAMFCPMICQEVLQTGMGSSKTYAISLPQRVNPASLGLILDYCQFHQVPGRSNKEHKTFDEQFIRMDTKKLCELTSAADSLQLKPLVDLTSRALARIIEGKTPEEIRETFHLPDDLTEEEKLEPLRNIADDPRIRLLNRLYARKRKELKERKKLKDVEAEEPKDERSVEDLLTFINGADRDVKGTRANKNKKKNRRRKDHAKDLSSKNANENDNKELNPLPSAYHNGNFDNSLECSANKHSRMQDLSAVNFSPMFEFIDGDLDDDLDPAMKEELDREVEDFARRLNSVWPERMQILSSTQDRRLVPISMNSNGSMPLYTSFDQR* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0685 356 SUPERFAMILY POZ domain 15 79 IPR011333 -
Apr6g0685 356 Pfam Skp1 family, dimerisation domain 116 153 IPR016072 GO:0006511
Apr6g0685 356 PANTHER SKP1 1 272 IPR016897 GO:0006511
Apr6g0685 356 Gene3D Potassium Channel Kv1.1; Chain A 10 160 IPR011333 -
Apr6g0685 356 PANTHER OS03G0107000 PROTEIN 1 272 - -
Apr6g0685 356 SUPERFAMILY Skp1 dimerisation domain-like 90 158 IPR036296 GO:0006511
Apr6g0685 356 SMART skp1_3 14 115 IPR001232 GO:0006511
Apr6g0685 356 MobiDBLite consensus disorder prediction 214 257 - -
Apr6g0685 356 MobiDBLite consensus disorder prediction 243 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0685 Apr-Chr6 10426233 10432874 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0685 - - gmx:100775387 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0685 6 10426233 10432874 Apr6g0685 6 10426233 10432874 ECH