Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0670 ATGGGTTCTCGCTACGAATTGGAGCTGAAGCTCTCATCGGCTCGCGGCCTCAAGAACGTGAACTGGCGCCACGGTGCCAACAGGCCATACGTCGTCGTTTGGGTGGACCCCGCCAACAAGCTCTCTTCAAGAGTTGATGAAAACGGCGACATCGATGCAAACTGGGATGAAACCCTCGTTATCCCTTTACCCCCCAAGCCCCTTGAAGATCTAACGCTTTACATCGATGTGGTCCACGCAGGCTCTGAAGAGGACACCAAGCCGCTGATCGGATCGGCTCGGCTCAAGCTCGTCGAAGTTCTCGATGATGTCGGAATCGGCGAGCGCGCCAGCCGCTCGCTAACGCTGAAGCGTCCCTCTGGAAGGCCACATGGCAAGGTTGAAGTTAAGGTTACCATCAGGGAGCCTAGCTATCGTGCGCAGGGTGGGTATCATGCCCCTCCTTATGGTGTCCCCCGGCAAACGGCGTCGTCGAGGGATTATTCCGCTGCGCCGCAGGGTTATGGGTTTCCATACGGCGGCCCGCCTCAGGGACAGGGACAGTATTATTCAGCTGCTCCGCCTGCGGGGTATCCTTATAATGCGCCGCCTCAAACGGCGTCGTATGGGCAAGGGTATCCGCAGCAAACGGCGCCGTATGGGCAAGGGTATCCTCAGCAAACGGCGCCGTATGGACAGGGGAGTGGTTATGGGAGTGGCTATGGGAATGCCGCCCCGGTTGAGGAAAAGAAAAAGAGCAAGTTTGGGGGAATGGGGACGGGATTGGCTGTGGGCGCCGTTGCTGGGGTTCTAGGTGGAATCGCACTTGTTGAAGGCGCTGAGTACGTTGAGGACAAGATTGCTGATGACGTGGCAGAGAGGGTTGAAGATGATCTTGGGTATGATGAAGGCGATGATTTCTAG 903 0.5714 MGSRYELELKLSSARGLKNVNWRHGANRPYVVVWVDPANKLSSRVDENGDIDANWDETLVIPLPPKPLEDLTLYIDVVHAGSEEDTKPLIGSARLKLVEVLDDVGIGERASRSLTLKRPSGRPHGKVEVKVTIREPSYRAQGGYHAPPYGVPRQTASSRDYSAAPQGYGFPYGGPPQGQGQYYSAAPPAGYPYNAPPQTASYGQGYPQQTAPYGQGYPQQTAPYGQGSGYGSGYGNAAPVEEKKKSKFGGMGTGLAVGAVAGVLGGIALVEGAEYVEDKIADDVAERVEDDLGYDEGDDF* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0670 300 Pfam C2 domain 6 101 IPR000008 -
Apr6g0670 300 ProSiteProfiles C2 domain profile. 1 114 IPR000008 -
Apr6g0670 300 MobiDBLite consensus disorder prediction 196 225 - -
Apr6g0670 300 SMART C2_3c 6 109 IPR000008 -
Apr6g0670 300 PANTHER CALCIUM-DEPENDENT LIPID-BINDING (CALB DOMAIN) FAMILY PROTEIN 1 299 - -
Apr6g0670 300 MobiDBLite consensus disorder prediction 197 225 - -
Apr6g0670 300 CDD C2_SRC2_like 6 129 IPR044750 GO:0006952
Apr6g0670 300 PANTHER INGRESSION PROTEIN FIC1 1 299 - -
Apr6g0670 300 Gene3D C2 domain 4 140 IPR035892 -
Apr6g0670 300 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 135 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0670 Apr-Chr6 9878266 9879338 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0670 - - gmx:100817630 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0670 6 9878266 9879338 Apr6g0670 6 9878266 9879338 ECH