Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0665 ATGGGCCTTTCACCTGAGCAAGGTGTTCAAGTTTCAGGGAACGTGTCTCTTCTTAAGGAGACAGTGGGAAATTATCAAGTAGAAACCACTCTCCCTGCTAGTTTGGAAGTTGAAACTTTTGTTGTTGTTTTTGCTGCAGTTTTGGCCTATAGAGTGGCGACTAAGAAGGAAGAAAACTTGCCACAAGTACCCATTTGGAAGAAGGATGACGAAAAAGTGGCAAGTCTAAATGCTGCAACGTCGGTAAAAGAAGTTCTTCAAAGATCTGGGAGTAAAGTTAAACTTGATGACTCAGATCAAAGAACCCCTGGAGGGAAATTCAATTTCTGGGAAATGAAGGGAGTTCTTAGAATCGAAATTGGTCCTCGTGATGTGTCTAGTGGTAGTGTGGTGATATCCATGAGAGATATCCCTGGGAAGCAAGGGAAAGTGTTTGGAATCTCTATGGACCCTTCAAATTTGGAGGCTTATGTTAAAGACAAGTTGAATGTGATACAGTCGATCTTCTCTTTTGGAAAGGGCAATGCATTTCGGGACAGTAATATTGTAGATGTGAGCACATACGATGATCTTAAAGTTGCAATATCACTAGGCAAATGGGCCAGGGGCCCTTGGTCTACAAGTCATGAAGATGAGTTAAAAGTAAAAGAGCAAACTGGAGCAACTATTAGGTGTTTTCCTTTTGAACAGCCGCCAAGGATTAAAAGATGCTTGATGACTGGAGATCCTGCTGAAGAAGTGGCTATTTTTGCCAAATCTTACTAA 765 0.4157 MGLSPEQGVQVSGNVSLLKETVGNYQVETTLPASLEVETFVVVFAAVLAYRVATKKEENLPQVPIWKKDDEKVASLNAATSVKEVLQRSGSKVKLDDSDQRTPGGKFNFWEMKGVLRIEIGPRDVSSGSVVISMRDIPGKQGKVFGISMDPSNLEAYVKDKLNVIQSIFSFGKGNAFRDSNIVDVSTYDDLKVAISLGKWARGPWSTSHEDELKVKEQTGATIRCFPFEQPPRIKRCLMTGDPAEEVAIFAKSY* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0665 254 Pfam Prolyl-tRNA synthetase, C-terminal 188 254 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Apr6g0665 254 PANTHER BNAC09G28510D PROTEIN 62 254 - -
Apr6g0665 254 SUPERFAMILY C-terminal domain of ProRS 182 254 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Apr6g0665 254 SMART ProRS_C_1_2 188 254 IPR016061 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
Apr6g0665 254 Gene3D - 62 171 IPR036621 -
Apr6g0665 254 PANTHER PROLYL-TRNA SYNTHETASE 62 254 IPR004499 GO:0004827|GO:0005524|GO:0005737|GO:0006433
Apr6g0665 254 Pfam Anticodon binding domain 75 160 IPR004154 -
Apr6g0665 254 SUPERFAMILY Class II aaRS ABD-related 64 163 - -
Apr6g0665 254 Gene3D - 183 254 IPR017449 GO:0000166|GO:0004827|GO:0005524|GO:0005737|GO:0006433
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0665 Apr-Chr6 9710322 9717329 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0665 K01881 - aprc:113866634 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0665 6 9710322 9717329 Apr6g0665 6 9710322 9717329 ECH