Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0642 ATGAGAGAATATGAATTCCCATGTTGTGAGCTAAACTTTTGGGTGTTTTTTATTATATGTTTGGTGCTTGTGGCACTTGCAGGTATTGCATCTGGCCTAGCTTTAGGACTATTGTCATTCAGCCATGTTGATCTTGAGGTTCTTATTAAGGCAGGTCGTCCAAAAGACAGAAAGAATGCAGAAAGGATTCAACCTTTGGTAAAGAATGGACATTTTGTCCTGTGTACCCTTCTTCTAGGAAAATCACTGGCTATGGAGGCCCTGCCAATTTTTATGGACTCAATCATCCCAACTTGGTTTACTATTCTCATGTCGGCACCCTTGGTGACTGTGTTTGCAGAGATTTTACCTCAAGCCATATGCTCTAGATATGGATTAACTTTAGGAGCAATAATGGCTCCCTTTGTTCAACTGCTTCTGCTGATCTTCTTCCCTGTAACCTATCCAGCTAGTAAGTTGTTGGATTGTGTTCTAGGGAAAGAGCATTCAGTTCTTCTGAGAAGATCAGAGTTGAAGACATTTGTGGATTTGCATGCAAATGAGGCAGGGAAAGGTGGAGAGTTGTCCCATCATGAAACTTCTATAATCACAGGTGCTATGGATTTGACTCAAAAGACAGCTAAAGATGCAATGACCCCCATTTCTGAAACTTTTTCTCTTGATATAAATTCCAAACTTGACATGCATACAATGACACAAATAATGAGCAAAGGTCACAGTCGCATACCTATACATTCTGGACATCCAACAAATATTATTGGCCTCATCTTGGTTAAAAATTTAATATTCTGCCGCCCAGAAGATGAGACCCCAATCAAGAATTTGATTATCAGAAAAATTCCTAGGGTTTATGAAAGTTGGCCACTATATGAGATAATGAATCAATTCCAGAAAGGTCATAGCCATATGGCTATTGTATTGAAATCCAACAAGGACACAGTGAGCACTGCAGCTCAAGCTGGGGGTACACCTACCTTTTTGAATAGAAGCTTTATTCATGAATCCACTGTATGCTCCAGTGACGCAGAATTTCATAGTCCAACATTAAAAAATGTCATGGAACTAGAGAATGAATTAAGTCAAGAATCCAGCCAGTGGGAGCAAGAAAATGAATATTTCTCACAAGAACAAATAGAGTCTCTTCCAGCTGTTCTGGATGAGGAGGTGATTGGCATCATCACAATGGAAGATGTTATGGAGGAACTGTTACAGGGAGACATATTGGATGAAACTGATAAATATGTTCACGTTCAAAAGAACATTAGAATTAACCTGCTGCAATCAGTAAAGTCACAATCAAGATCATCAAGGAGAGCTTCTGGTTCTGGTCGTTGTTAA 1338 0.3939 MREYEFPCCELNFWVFFIICLVLVALAGIASGLALGLLSFSHVDLEVLIKAGRPKDRKNAERIQPLVKNGHFVLCTLLLGKSLAMEALPIFMDSIIPTWFTILMSAPLVTVFAEILPQAICSRYGLTLGAIMAPFVQLLLLIFFPVTYPASKLLDCVLGKEHSVLLRRSELKTFVDLHANEAGKGGELSHHETSIITGAMDLTQKTAKDAMTPISETFSLDINSKLDMHTMTQIMSKGHSRIPIHSGHPTNIIGLILVKNLIFCRPEDETPIKNLIIRKIPRVYESWPLYEIMNQFQKGHSHMAIVLKSNKDTVSTAAQAGGTPTFLNRSFIHESTVCSSDAEFHSPTLKNVMELENELSQESSQWEQENEYFSQEQIESLPAVLDEEVIGIITMEDVMEELLQGDILDETDKYVHVQKNIRINLLQSVKSQSRSSRRASGSGRC* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0642 445 ProSiteProfiles CNNM transmembrane domain profile. 9 192 IPR002550 -
Apr6g0642 445 SUPERFAMILY CBS-domain pair 345 417 IPR046342 -
Apr6g0642 445 CDD CBS_pair_CorC_HlyC_assoc 206 307 IPR044751 -
Apr6g0642 445 Coils Coil 349 369 - -
Apr6g0642 445 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 1 440 IPR045095 GO:0010960
Apr6g0642 445 SUPERFAMILY CBS-domain pair 195 313 IPR046342 -
Apr6g0642 445 Gene3D - 192 323 IPR046342 -
Apr6g0642 445 PANTHER CBS DOMAIN PROTEIN 1 440 - -
Apr6g0642 445 Pfam Cyclin M transmembrane N-terminal domain 18 189 IPR002550 -
Apr6g0642 445 Gene3D - 337 410 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0642 Apr-Chr6 9396680 9404324 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0642 K16302 - gmx:100791387 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0642 6 9396680 9404324 Apr6g0642 6 9396680 9404324 ECH