Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0627 ATGCAAGAAAATAATTTAATTGAAGATCTTCCGTCAATTTTTCGTAATTTATCTGGTGGTTGTCTTAGATATTCATTACAAGAGTTGGACCTGAACAATAATCAAATCATTGGCTCCTTAACTGACCTTTCAGTGTTCTCATCCTTGAAAACATTGGATCTTTCCGAAAATAATTTAAATGGAATACATAATGGTAGCAAATTGCCCCCTCAGTTAGAGTCTTTGTCGATCAAATCGAACTCTTTGGAAGGTGGTATTCCAAAATCATTTGGGAACGCATGTGTTTTGAGCTCATTGGACCTGTCTTCTAACAATTTGAATACAGAGCTCCCAGTGATAATCCGTCGTTTATCTGGGTGTGCTAGATACTCCCTGCAAATATTGGATCTGGGAGAAAACAAAATCAATGGCACGTTGCCTGACCTCTCAATGTTTTCAACCTTGAAAACATTGGATCTTTCTGAAAATAATTTAAATGGAATACCAGATGGTAGCAAATTGCCCCCTCTGTTGGAATCTTTGTCGATCCGATCGAACTCCTTAGAAGGTGGAATTCCAGAATCATTTGGGAGCACATGTACATTGCAATCACTGGACCTGTCCAATAGTAGTTTGAGTGAAGAGCTTCCCACGATAATCCATCACTTGTCAAGATATGCTAGATACTCATTGCAAGAATTATATCTAAGCATGAATCAAATCAACGGCACTCTGCCCAACCTCCGTCCACTGCTCCCATCTTTGAAAGCATTGGATCCTAGTGAAAACAGGCTTAATGGGACCATTCCTAAAGATGTTAAATTTCCAACAGAACTTGGGAGTTTATTTTTGAATTCAAACTCTATGAAAGGTGTGATCACTGATTCCCACTTTGCTAATATGTCTGAGTTAGTCTCATTGGACTTGTCTGATAACTCATTGGCCTTGGCATTTACCCACAATTGGGTCCCACCATTTCAGTTGAGCTACATACAATTGAGATCTTGCACGCTAGGTCCAGCATTTCCCAAATGGTTGCAAACACAAAATAACTACCAAAGTATTGACATTTCTGATGCTGGAATATCAGATATTGTTCCACGTTGGTTTTGGGCTAAATTAGCATCGCAAGTATGGAGGACAACGAATATTTCACATAACAATCTCAAAAGTGTAGTTTCAAATTTTCCACTAACGAATCCTCGATATTCTCTAATTCTTGCATCGAATCAATTTGAAGGTCCAATACCACCATTTCTACGACGTTCAACGATTCTCGATCTATCAAACAATACATTTTCAAATTCTCTTCCATTTTTATGTGCCAGCGGTGTAGCCGATACTTTATACCAATTAGACCTTTCAAATAATGAATTATCTGGAGAAATTCCAGATTGTTGGAGCCAATTCAAGTCACTAGTTTATCTAGATTTGAGTCATAATAAATTTTCAGGAAAGATTCCTACTTCAATAGGATCACTTCTTCAACTTCAAGCACTGCTATTGAGAAACAATAACTTAACAGAGGAAATTCCTTTCTCGTTGAGAAGTTGCACAAAGTTAGTAATGATAGATATGGCAGAAAATGGATTATCAGGACCTATCCCTACTTGGATTGGAAGCACGTTGCAAGTGTTGCAAATTTTAATCTTAGCAAGGAATCAATTCTTTGGAAGTTTGCCATTACAAATTTGTTATCTAAAAAGCATTCAACTTTTGGATCTCTCACTCAATAATTTCTCTGGACAAATTCCTAAATGCTTCCAAAATTTCACTTCAATGGCTCGAAACACTTCCTCGAAGCATCATCAACATTATTTTGTCAACACGAGTTATCTGACGGAAAATACGTCTTATGATTTGAATGCAATCTTAATGTGGAAAGGTGCGGAAGAAATGTTCACGAATTATGGGCTTTTCCTTTTAAAAAGCATTGATCTCTCTAGCAACAACTTCTCAGGAGAAATTCCAGCAGAAATAGAGGATTTATTTGCATTGATTTCATTGAATTTATCAAGAAACAATTTGAGAGGAGAAATTCCTTCAAATATTGGAAAGCTTGCATCACTTGAATTTCTTGACTTATCAAGAAACCAATTTGTTGGTTCAATTCCATGGAGTCTTACTCAAATTGATCGACTCACCATGTTAGATTTGTCGCATAACCATCTAAGAGGAGCAATTCCAACTGGTACACAATTACAAAGTTTCAATGCTTCCAGTTATGAAGATAATTTTGATCTTTGTGGGGCGCCACTTGAGAAATTGTGTGTTGAAGGGGAACCACCGCAAGAACCAATTCAAGAGAAAGATGATTCGCTCTTCACTCGTGGATTTTACATTAGCATGACATTTGGATTTGTTATAGGCTTTTGGGGGATCTTCGGCTCAATCTTGATTAAGCGTTCTTGGAGGCATGCTTATTTCAAGTTCTTGAACAATTTCATAGACTCTGTTTATGTCATGGTTGCAATTAAACTTATCAAGTACAGGCGTTGA 2478 0.3713 MQENNLIEDLPSIFRNLSGGCLRYSLQELDLNNNQIIGSLTDLSVFSSLKTLDLSENNLNGIHNGSKLPPQLESLSIKSNSLEGGIPKSFGNACVLSSLDLSSNNLNTELPVIIRRLSGCARYSLQILDLGENKINGTLPDLSMFSTLKTLDLSENNLNGIPDGSKLPPLLESLSIRSNSLEGGIPESFGSTCTLQSLDLSNSSLSEELPTIIHHLSRYARYSLQELYLSMNQINGTLPNLRPLLPSLKALDPSENRLNGTIPKDVKFPTELGSLFLNSNSMKGVITDSHFANMSELVSLDLSDNSLALAFTHNWVPPFQLSYIQLRSCTLGPAFPKWLQTQNNYQSIDISDAGISDIVPRWFWAKLASQVWRTTNISHNNLKSVVSNFPLTNPRYSLILASNQFEGPIPPFLRRSTILDLSNNTFSNSLPFLCASGVADTLYQLDLSNNELSGEIPDCWSQFKSLVYLDLSHNKFSGKIPTSIGSLLQLQALLLRNNNLTEEIPFSLRSCTKLVMIDMAENGLSGPIPTWIGSTLQVLQILILARNQFFGSLPLQICYLKSIQLLDLSLNNFSGQIPKCFQNFTSMARNTSSKHHQHYFVNTSYLTENTSYDLNAILMWKGAEEMFTNYGLFLLKSIDLSSNNFSGEIPAEIEDLFALISLNLSRNNLRGEIPSNIGKLASLEFLDLSRNQFVGSIPWSLTQIDRLTMLDLSHNHLRGAIPTGTQLQSFNASSYEDNFDLCGAPLEKLCVEGEPPQEPIQEKDDSLFTRGFYISMTFGFVIGFWGIFGSILIKRSWRHAYFKFLNNFIDSVYVMVAIKLIKYRR* 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0627 825 ProSiteProfiles Leucine-rich repeat profile. 147 168 IPR001611 GO:0005515
Apr6g0627 825 ProSiteProfiles Leucine-rich repeat profile. 223 245 IPR001611 GO:0005515
Apr6g0627 825 PANTHER OS10G0469600 PROTEIN 229 814 - -
Apr6g0627 825 PANTHER OS10G0469600 PROTEIN 2 142 - -
Apr6g0627 825 PANTHER OS10G0469600 PROTEIN 124 270 - -
Apr6g0627 825 SUPERFAMILY L domain-like 398 747 - -
Apr6g0627 825 ProSiteProfiles Leucine-rich repeat profile. 48 69 IPR001611 GO:0005515
Apr6g0627 825 Gene3D Ribonuclease Inhibitor 291 753 IPR032675 -
Apr6g0627 825 PANTHER BNAC08G45300D PROTEIN 2 142 - -
Apr6g0627 825 PANTHER BNAC08G45300D PROTEIN 229 814 - -
Apr6g0627 825 PANTHER BNAC08G45300D PROTEIN 124 270 - -
Apr6g0627 825 SUPERFAMILY L domain-like 4 161 - -
Apr6g0627 825 PRINTS Leucine-rich repeat signature 49 62 - -
Apr6g0627 825 PRINTS Leucine-rich repeat signature 704 717 - -
Apr6g0627 825 ProSiteProfiles Leucine-rich repeat profile. 25 47 IPR001611 GO:0005515
Apr6g0627 825 SUPERFAMILY L domain-like 143 410 - -
Apr6g0627 825 Pfam Leucine Rich Repeat 465 487 IPR001611 GO:0005515
Apr6g0627 825 Pfam Leucine rich repeat 635 693 IPR001611 GO:0005515
Apr6g0627 825 Gene3D Ribonuclease Inhibitor 1 66 IPR032675 -
Apr6g0627 825 Gene3D Ribonuclease Inhibitor 67 290 IPR032675 -
Apr6g0627 825 SMART LRR_typ_2 145 168 IPR003591 -
Apr6g0627 825 SMART LRR_typ_2 294 313 IPR003591 -
Apr6g0627 825 SMART LRR_typ_2 536 560 IPR003591 -
Apr6g0627 825 SMART LRR_typ_2 656 680 IPR003591 -
Apr6g0627 825 SMART LRR_typ_2 704 727 IPR003591 -
Apr6g0627 825 SMART LRR_typ_2 487 511 IPR003591 -
Apr6g0627 825 SMART LRR_typ_2 46 69 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0627 Apr-Chr6 9190374 9193129 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0627 26 782 Receptor kinase-like Gene Family AT3G05660 32.617 6.05e-81 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0627 - - aprc:113866610 1225.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0627 6 9190374 9193129 Apr6g0627 6 9190374 9193129 ECH