Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0621 ATGCAATTCTTTGGGAGTTCTGAGATCAGTCCATCACCGCCTGCGCCGACAGCTTCAGGAAACAATGGCCATATGATGTATGTGTTCAATAGGAATGGTGTGTGCTTGCTCTACAGGGAGTGGAATCGCCCCTTGCGGACGTTGAATGCCCAGCAAGACCATAAGTTAATGTTTGGTCTGCTTTTCTCTCTTAAGTCATTAACTGCCAAGATGGACCCCACTAGTGCTGAGAAAGGAAACCTTGGTGTGCCTCAGTTACCTGGCCAAGGTTGTTCATTTCACAGTTTCCGCACTAATACATACAAACTTAGTTTCATGGAAAGTCCTTCTGGAATAAAGATTATCTTGGTGACTCATCCCAGAACTGGTGATCTACGGGAATCCTTAAAATATATCTATAATTTGTATGTTGAATATGTTGTCAAGAATCCTCTGTATACACCAGGATCTCCTATTAGGTGTGAGCTGTTCAATACAACGTTGGACCAGTATGTGAGAGGCATTGCGTAG 510 0.4353 MQFFGSSEISPSPPAPTASGNNGHMMYVFNRNGVCLLYREWNRPLRTLNAQQDHKLMFGLLFSLKSLTAKMDPTSAEKGNLGVPQLPGQGCSFHSFRTNTYKLSFMESPSGIKIILVTHPRTGDLRESLKYIYNLYVEYVVKNPLYTPGSPIRCELFNTTLDQYVRGIA* 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0621 169 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1-LIKE 1 168 - -
Apr6g0621 169 SUPERFAMILY SNARE-like 24 167 IPR011012 -
Apr6g0621 169 MobiDBLite consensus disorder prediction 1 21 - -
Apr6g0621 169 SMART Sybindin_2 23 168 IPR007233 GO:0016192|GO:0030008
Apr6g0621 169 CDD TRAPPC1_MUM2 24 164 - -
Apr6g0621 169 Gene3D - 24 169 - -
Apr6g0621 169 Pfam Sybindin-like family 24 166 IPR007233 GO:0016192|GO:0030008
Apr6g0621 169 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 1 168 IPR007233 GO:0016192|GO:0030008
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0621 Apr-Chr6 9063244 9068885 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0621 K20300 - csin:114295032 339.732
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0621 6 9063244 9068885 Apr6g0621 6 9063244 9068885 ECH