Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0619 ATGAAAAACACCATAATTCTATACCCTACCAATGGTTGGGGACACTTAGTCCCAATGGTAGAACTAGGCAAGTTCATCACCACCCACCACCATACAACCCTCTCAATCAAAATCCTCCTCCCTTCACCACCTAACACCGCCACCCTCCAATACATCGCTGCCGTCTCCGCCACCGCGCCGTCCATGACATTCCACCACCTTTCACCCTCCCAACACTTACTCTACGCCCTCCAATCCCTCATTTCACAATCATCCAAACCCAAAGCCTTCATCTTAGACTTCTTCAACCACTCCGCTACTGACGTCACGAAATTGCTCAACATCCCCACATACTTTTACTTCCCCAACGCCGCAAGTTGCGTTGCAGTTTTTCTCTACACGCCAACCCTTCACCACAACACCAAGAACGGATACACTCATTCCAATTACAATGACATGCTACGCCACATTCCCGGTTTGCCGCCGTTGTCGCCGGAGGACATGCCGGAGCCTCTCCTCGATCGCCGGAGCCGGAGCTACGAGTCATTTGTCAACATGTCAATGAAAATGAGGAAAGCTAACGGAATTATAGTTAACACGTTTAGTAAGCTTGAGAATAAAGCTTTATTGACGTTGGAGAATGGAGGTTGTGTGTTGGAAAGACATGATCCACGTGTTTTTTGTGTTGGGCCATTGGTTTCCAACGTTGGATTTGCAAACAACGATGATGGTGGTTGCTTAAGTTGGCTCGACTCACAACCGAGTGGAGCCGTTGTGTTTTTAAGTTTTGGAAGTTATGGAAGGTTCTCGAAGGTTCAGTTAAGGGAAATAGCGGTTGCGTTGGAGAGGAGTGGACGAAGGTTTTTGTGGGTTGTGAGGGACCCAATTGGGTATGAGAGAAGAGAATTGAGTTTAGAGGAATTGTTGCCAAAAGGGTTTTTGGAGAGAACAAAGGAGAGGGGAATGGTGGTGAAGAATTGGGCACCACAGGTTAAGGTACTGAGTCATAACTCGGTGGGTGGGTTTGTGACTCATTGTGGGTGGAACTCGGTGATGGAAGCAGTTTCTTGGGGAGTGCCGATGGTGGCGTGGCCTTTGTATGCGGAGCAAAGGTTGAATAAGGTGGTTATGGTGGAAGAGATGAAGGTGGCTTTGCCTTTGAAAGAGAACGAGGATGGGTTTGTTAGGGCAGCTGAGTTGGAGGGCCGAGTTAGAGAGCTTATGGACTCGGAGAAAGGGAGAGGGAAAGAGATCAGAGAAAGAGTATTGGGTGCGAGAAATGACGCTGTTGCTGCCCTCGGTCACAGTGGATCTTCACGGGTTGCTTTGGATGAGTTGGTTGAGTTGTGGACACAATGA 1338 0.4858 MKNTIILYPTNGWGHLVPMVELGKFITTHHHTTLSIKILLPSPPNTATLQYIAAVSATAPSMTFHHLSPSQHLLYALQSLISQSSKPKAFILDFFNHSATDVTKLLNIPTYFYFPNAASCVAVFLYTPTLHHNTKNGYTHSNYNDMLRHIPGLPPLSPEDMPEPLLDRRSRSYESFVNMSMKMRKANGIIVNTFSKLENKALLTLENGGCVLERHDPRVFCVGPLVSNVGFANNDDGGCLSWLDSQPSGAVVFLSFGSYGRFSKVQLREIAVALERSGRRFLWVVRDPIGYERRELSLEELLPKGFLERTKERGMVVKNWAPQVKVLSHNSVGGFVTHCGWNSVMEAVSWGVPMVAWPLYAEQRLNKVVMVEEMKVALPLKENEDGFVRAAELEGRVRELMDSEKGRGKEIRERVLGARNDAVAALGHSGSSRVALDELVELWTQ* 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0619 445 Gene3D Glycogen Phosphorylase B; 236 427 - -
Apr6g0619 445 PANTHER GLYCOSYLTRANSFERASE 1 444 - -
Apr6g0619 445 ProSitePatterns UDP-glycosyltransferases signature. 320 363 IPR035595 -
Apr6g0619 445 PANTHER GLYCOSYLTRANSFERASE 1 444 - -
Apr6g0619 445 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 3 444 - -
Apr6g0619 445 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 231 372 IPR002213 GO:0008194
Apr6g0619 445 Gene3D Glycogen Phosphorylase B; 5 433 - -
Apr6g0619 445 CDD GT1_Gtf-like 5 426 IPR002213 GO:0008194
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0619 Apr-Chr6 9035614 9036986 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0619 2 444 Glycosyltransferase AT3G16520 43.816 2.16e-128 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0619 - K12938 gmx:100807122 687.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0619 6 9035614 9036986 Apr6g0619 6 9035614 9036986 ECH