Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr6g0304 ATGTTTTCAGGGTTCATTACTTCTTTTTGTGCAACGCCATCAACGATGTTAACTATTCTCGACTTGTCTAGTAATTTACTAGCGGGGACACTTCCAGATTGTTGGGGGAGATTTCAAAGTTTAGTTATTCTAAATCTGGCAAAAAATAATTTATCAGGTAGCATACCCAAGTCATTTGCCACTTTACAAGAAATTGAGTCTATTAATTTAAATAGCAACAACTTCTCGGGAACATTACCAGCATGGGTAGGCCATAACTTGCGACAATTGATGGTGTTGCGTCTAGAGGCAAATAAATTCAATGGAAACATACCTACAAGCCTATGTAATCTTCTATTTCTTCAAGTGTTAGATCTCTCTAAAAATAATATTAGTGGGAGAATTCCAGTGTGTCTGAGTGGCATAATTGCTTTGTCAAATACGACGTTTTCAAGACAGACAATGGTTTATCCAATACATGATGTTGGGTTAACGGATCCTGATCCAATTCAAAGTTTCAATGACAAAGCCATGTTGGAATGGAAAGGGCAAAACCAAGAATATGAGGAAAATCTAGGATTTATGACAATCATAGATCTTTCTTGCAACCAATTAATAGGAGAGATACCCAAAAGTATATCAATACTTGCGGCATTAGCTGGCTTGAATCTCTCAAGAAATAATCTCACAGGTTTCATTCCCTACAACATTGGTCATATGAAAATGTTGGAATCACTTGACTTGTCAAGAAATCATCTTTATGGAAGAATGCCAGCAAGCTTTTCAAATTTGACTTTTCTCAGTTACATGGACTTGTCTTTCAACAACTTGTCAGGAAAAATTCCACAAAGCACTCAGATACAAACCTTTGATGCCTCTGCCTATAAAGGAAATACTGGGCTTTGTGGTCCACCACTCCCAAATCATTGCCCAGGGGATGCTGTTTCGCCAAATGGAAGGGTAGATAAAAACAGTGTTGAAGAAGATGGAGACGAAGATGAACTCATAACCATTGGTTTTTACATCACCCTGGGGTTTGGATTTTGTGTTGGATTCTGGAGTGTTTGTGGAACTTTAATTATAAAAAGTTCATGGAGACGTGCCTATTTTCAGTTCTTCAACAACATGAATGACTGCATATGTGTGACACTCGTTGTCCTTATGGCTCGAATGAAAAGGAGATTTCAAGTTCAAGATTAA 1179 0.3749 MFSGFITSFCATPSTMLTILDLSSNLLAGTLPDCWGRFQSLVILNLAKNNLSGSIPKSFATLQEIESINLNSNNFSGTLPAWVGHNLRQLMVLRLEANKFNGNIPTSLCNLLFLQVLDLSKNNISGRIPVCLSGIIALSNTTFSRQTMVYPIHDVGLTDPDPIQSFNDKAMLEWKGQNQEYEENLGFMTIIDLSCNQLIGEIPKSISILAALAGLNLSRNNLTGFIPYNIGHMKMLESLDLSRNHLYGRMPASFSNLTFLSYMDLSFNNLSGKIPQSTQIQTFDASAYKGNTGLCGPPLPNHCPGDAVSPNGRVDKNSVEEDGDEDELITIGFYITLGFGFCVGFWSVCGTLIIKSSWRRAYFQFFNNMNDCICVTLVVLMARMKRRFQVQD* 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr6g0304 392 PANTHER LRR RECEPTOR-LIKE KINASE 2 80 - -
Apr6g0304 392 PANTHER LRR RECEPTOR-LIKE KINASE 66 386 - -
Apr6g0304 392 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 2 80 - -
Apr6g0304 392 PANTHER RECEPTOR-LIKE PROTEIN 12 ISOFORM X1 66 386 - -
Apr6g0304 392 Pfam Leucine Rich Repeat 114 133 IPR001611 GO:0005515
Apr6g0304 392 SUPERFAMILY L domain-like 14 300 - -
Apr6g0304 392 Gene3D Ribonuclease Inhibitor 1 309 IPR032675 -
Apr6g0304 392 PRINTS Leucine-rich repeat signature 17 30 - -
Apr6g0304 392 PRINTS Leucine-rich repeat signature 233 246 - -
Apr6g0304 392 Pfam Leucine rich repeat 17 75 IPR001611 GO:0005515
Apr6g0304 392 Pfam Leucine rich repeat 189 246 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr6g0304 Apr-Chr6 3179646 3180893 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr6g0304 17 363 Miscellaneous Gene Families AT1G74190 34.625 1.36e-53 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr6g0304 - K13466 aprc:113868003 645.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr6g0304 6 3179646 3180893 Apr6g0304 6 3179646 3180893 ECH