LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Apr5g1889	ATGAGTGGAGCTGTTCTTGTGGCTGTTGCTGCTGCCATCGGTAACTTACTGCAAGGATGGGATAATGCGACTATTGCAGGATCTATCTTGTACATTAAGAGGGAGTTTCAATTAGAGAGTGAACCCACAATTGAAGGTCTAATTGTGGCTATGTCACTTATTGGAGCCACCGTGGTTACTACTTGCTCCGGGTCCCTATCAGACTTGCTAGGCAGGCGTCCAATGTTGATTATCTCCTCTGTCCTTTATTTTGTTAGTTCTATTGTGATGCTTTGGTCTCCAAATGTTTATATCCTCCTCTTTGCTAGACTTTTAGATGGTTTGGGAATTGGTTTGGCAGTTACCTTGGTACCTCTTTACATATCTGAGACAGCTCCTCCCGAGATTAGGGGATTACTCAACACACTTCCACAGTTTACTGGTTCTGCTGGAATGTTTTTCTCCTACTGTATGGTGTTTGGGATGTCACTAATGAAGGCTCCAAGCTGGAGACTTATGTTGGGTGTTCTGTCAATCCCCTCTGTTATTTATTTTGCACTCGCACTATTTTTCTTGCCCGAGTCTCCAAGATGGCTTGTTAGTAAAGGCCGTATGCTTGAGGCCAAGAAGGTTTTGCAGCGCCTTCGTGGAAGGGAAGATGTTTCTGGTGAGATGGCTTTACTGGTTGAGGGTCTTGGAGTTGGGGGTGACACAGCCATAGAAGAGTACATAATTGGTCCAGCCAATGAACTTGCTGATGAAGAGGATCCATCTAAAGAAAGAGATCAGATCAAGTTGTATGGGCCAGAACAAGGTCAGTCTTGGGTTGCTAGACCTGTCGCTGGACAAAGTTCTGTTGGCCTTGTATCACGGAAAGGAAGCTTGGTAAATCCGAGTGGTCTAGTGGACCCTCTAGTGACACTCTTTGGTAGTGTCCATGAGAAGCTCCCAGAAACAGGAAGCATGCGAAGCACCCTTTTTCCACACTTTGGAAGCATGTTTAGTGTTGGGGGAAATCAGCCTAGGAATGAAGATTGGGATGAAGAAAGCCTTGCCAGAGAGGGTGATGATTATGTATCTGATGCTGCTGCTGGTGATTCTGATGACAATTTGCAGAGTCCATTGATCTCACGTCAAACAACAAGTCTGGATAAGGACATACCTCCTGCCCATAGTAGCCTTTCAAGCATGAGACAAGGTAGTCTTTTGCATGGAAATGCGGGAGAACCTGCTGGTAGTACTGGGATTGGTGGTGGTTGGCAGCTAGCATGGAAATGGTCTGAAAGGGAAGGCCTAGATGGAAAGAAGGAAGGTGGTTTCAAGAGAATATATTTACACCAAGAGGGTGGTCCTGGGTCTATGCGTGGGTCGGTGGTTTCACTTCCTGGTGGAGAAATGCCAACAGATGGTGAGGTTGTACAGGCTGCTGCTCTGGTGAGTCAGCCAGCTCTTTATAACAAAGAACTTATGCATGAACAGCCAGTTGGACCAGCTATGATTCATCCATCCGAGACAGCTGCAAAAGGGCCAAGTTGGAGTGATCTTTTTGAACCTGGGGTGAAACATGCATTGGTTGTAGGGGTGGGAATTCAAATCCTGCAGCAGTTCTCTGGTATAAATGGGGTCCTCTACTATACACCTCAAATTCTTGAGCAGGCAGGTGTTGGTTATCTTCTTTCAAACCTGGGCCTTGGTTCTACTTCTTCATCATTTCTTATAAGTGCTGTGACAACCTTGTTGATGCTTCCTTGTATAGCTGTTGCAATGAGACTCATGGATATTTCTGGCAGAAGAACTTTGCTGCTCAGTACAATCCCGGTCTTGATAATATCTCTTCTCATATTAGTCCTGGGGAGTCTTGTAGATTTGGGCAGCACAGCAAACGCATCAATCTCAACCATTAGTGTTATTGTCTATTTCTGTTTCTTTGTCATGGGATTTGGGCCGATTCCGAATATACTTTGTGCAGAGATCTTCCCCACTCGAGTTCGTGGTCTCTGTATCGCCATATGTGCTCTTACCTTTTGGATCTGTGATATCATTGTCACCTACACACTCCCCGTTATGCTTAATTCTGTAGGCCTCGCTGGTGTTTTTGGTATTTATGCAGTCGTGTGCTTCATAGCTTGGGTGTTTGTCTTTTTGAAAGTTCCAGAAACCAAGGGCATGCCACTGGAAGTGATCATTGAGTTCTTCTCTGTCGGAGCAAAACAGGTTGACGCTGCCAGGCATAACTGA	2217	0.4551	MSGAVLVAVAAAIGNLLQGWDNATIAGSILYIKREFQLESEPTIEGLIVAMSLIGATVVTTCSGSLSDLLGRRPMLIISSVLYFVSSIVMLWSPNVYILLFARLLDGLGIGLAVTLVPLYISETAPPEIRGLLNTLPQFTGSAGMFFSYCMVFGMSLMKAPSWRLMLGVLSIPSVIYFALALFFLPESPRWLVSKGRMLEAKKVLQRLRGREDVSGEMALLVEGLGVGGDTAIEEYIIGPANELADEEDPSKERDQIKLYGPEQGQSWVARPVAGQSSVGLVSRKGSLVNPSGLVDPLVTLFGSVHEKLPETGSMRSTLFPHFGSMFSVGGNQPRNEDWDEESLAREGDDYVSDAAAGDSDDNLQSPLISRQTTSLDKDIPPAHSSLSSMRQGSLLHGNAGEPAGSTGIGGGWQLAWKWSEREGLDGKKEGGFKRIYLHQEGGPGSMRGSVVSLPGGEMPTDGEVVQAAALVSQPALYNKELMHEQPVGPAMIHPSETAAKGPSWSDLFEPGVKHALVVGVGIQILQQFSGINGVLYYTPQILEQAGVGYLLSNLGLGSTSSSFLISAVTTLLMLPCIAVAMRLMDISGRRTLLLSTIPVLIISLLILVLGSLVDLGSTANASISTISVIVYFCFFVMGFGPIPNILCAEIFPTRVRGLCIAICALTFWICDIIVTYTLPVMLNSVGLAGVFGIYAVVCFIAWVFVFLKVPETKGMPLEVIIEFFSVGAKQVDAARHN*	739

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Apr5g1889	738	PANTHER	-	1	735	-	-
	Apr5g1889	738	MobiDBLite	consensus disorder prediction	359	395	-	-
	Apr5g1889	738	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	7	714	IPR020846	GO:0022857
	Apr5g1889	738	PANTHER	MONOSACCHARIDE-SENSING PROTEIN 1	1	735	-	-
	Apr5g1889	738	PRINTS	Sugar transporter signature	15	25	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Apr5g1889	738	PRINTS	Sugar transporter signature	100	119	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Apr5g1889	738	PRINTS	Sugar transporter signature	527	537	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Apr5g1889	738	PRINTS	Sugar transporter signature	626	647	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Apr5g1889	738	PRINTS	Sugar transporter signature	649	661	IPR003663	GO:0016020\|GO:0022857\|GO:0055085
	Apr5g1889	738	ProSitePatterns	Sugar transport proteins signature 2.	105	130	IPR005829	GO:0016021\|GO:0022857\|GO:0055085
	Apr5g1889	738	Gene3D	MFS general substrate transporter like domains	2	258	IPR036259	-
	Apr5g1889	738	CDD	MFS_GLUT_like	13	193	-	-
	Apr5g1889	738	CDD	MFS_GLUT_like	515	712	-	-
	Apr5g1889	738	Pfam	Sugar (and other) transporter	7	221	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Apr5g1889	738	Pfam	Sugar (and other) transporter	501	722	IPR005828	GO:0016021\|GO:0022857\|GO:0055085
	Apr5g1889	738	Gene3D	MFS general substrate transporter like domains	476	727	IPR036259	-
	Apr5g1889	738	MobiDBLite	consensus disorder prediction	352	400	-	-
	Apr5g1889	738	SUPERFAMILY	MFS general substrate transporter	6	719	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Apr5g1889	Apr-Chr5	21919976	21926573	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Apr5g1889	1	738	Organic Solute Cotransporters	AT4G35300	73.279	0.0	1047

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Apr5g1889	-		-	gmx:100790278	1303.12

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Apr5g1889	5	21919976	21926573	Apr5g1889	5	21919976	21926573	ECH