Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1888 ATGACAATAGAGTTGACTGAAGGATTTGCAGCTGGCGTGTTCATCTATATTCAGATGAGGCTTTTCGCAACCCAATCAGAATATGCCGATCGCCTCGCTGCAGCTATTGAATCTGAAAACCATTGTACAAGTCAAATGAGATCACTGATTGATCAGATTAGCTTGCAGCAAGGACGAATTGTGGCCCTAGAAGAAGAGAGGAAACGTCGAGATGAAGAATGCAGACAAATGAAATCTCTTGTACAAGATCTTGAAAGAAAAGACCTGCAGAGGCTGATCAATAAAGTGCAGGTTCCAGTGGCAGCTGTTGTGATCATGGCATGTAATCGTGCTGATTACCTAGAGAGGACTATTAATTCTGTATTGAAATATCAAAGGCACATTTCTACAAGATATCCTTTATTTGTATCTCAGGATGGATCAAATCCAGATGTTAAAAGTAAGGCTTTGAGCTATGATCAGTTATCATATATGCAGCACTTGAATTTTGAACCAGTTCAAACTGAACAGCCAGGAGAATTAATTGCTTACTACAAAATTGCAAGTCATTATAAATGGGCTCTAGATCAACTGTTCTACAAGCATAACTTCAGTCGAGTAATCATCCTTGAAGATGACATGGAGATAGCACCTGATTTTTTTGATTATTTTGAAGCTGCTGTGACTCTCCTTGACAAGGATAAGTCCATTATGGCTGTTTCCTCATGGAATGACAATGGACAAAAGCAGTTTGTACATGATCCATATGAACTTTATCGCTCAGATTTCTTTCCTGGACTAGGATGGATGCTGGCTAAATCTACATGGGATGAGCTATCACCAAAATGGCCAAAAGCTTACTGGGATGACTGGTTGAGATTGAAAGAGAATCACAAAGGACGACAGTTTATCCGACCAGAAGTATGCAGAACATATAATTTTGGCGAGCATGGTTCTAGTTTGGGACAGTTTTTTAAGCAATATCTAGAGCCAATCAAGCTGAATGAAGTCCAGGTTGATTGGAAGTCAATGGACTTGAGCTATTTACTGGAGGATAAATATTCTGTGCACTTTGCAAATATCGTAAAGAAAGCTAAACCTGTCTATGGAGCTGACATGGTTCTAAAGGCATATAACATAGATGGCGATGTGCGCATTAAATATAAAGATCAGTCAGACTTTGAAAACATTGCTCGTCAATTTGGTATATTTCAAGAGTGGAAGGATGGTGTACCCAGGACAGCCTATAAAGGAGTAGTTGTTTTCAGATATCATACACGGCGTATATTCCTTGTTGGTCCAGAATCTTTGAAGTTACTTCAGATTGAAAATGCTGGATGA 1320 0.3917 MTIELTEGFAAGVFIYIQMRLFATQSEYADRLAAAIESENHCTSQMRSLIDQISLQQGRIVALEEERKRRDEECRQMKSLVQDLERKDLQRLINKVQVPVAAVVIMACNRADYLERTINSVLKYQRHISTRYPLFVSQDGSNPDVKSKALSYDQLSYMQHLNFEPVQTEQPGELIAYYKIASHYKWALDQLFYKHNFSRVIILEDDMEIAPDFFDYFEAAVTLLDKDKSIMAVSSWNDNGQKQFVHDPYELYRSDFFPGLGWMLAKSTWDELSPKWPKAYWDDWLRLKENHKGRQFIRPEVCRTYNFGEHGSSLGQFFKQYLEPIKLNEVQVDWKSMDLSYLLEDKYSVHFANIVKKAKPVYGADMVLKAYNIDGDVRIKYKDQSDFENIARQFGIFQEWKDGVPRTAYKGVVVFRYHTRRIFLVGPESLKLLQIENAG* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1888 439 PANTHER PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE 11 437 - -
Apr5g1888 439 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 99 322 IPR029044 -
Apr5g1888 439 PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE-RELATED 11 437 - -
Apr5g1888 439 SUPERFAMILY Nucleotide-diphospho-sugar transferases 102 435 IPR029044 -
Apr5g1888 439 CDD GT13_GLCNAC-TI 100 429 - -
Apr5g1888 439 Coils Coil 46 87 - -
Apr5g1888 439 Gene3D - 361 435 - -
Apr5g1888 439 Pfam GNT-I family 10 436 IPR004139 GO:0006486|GO:0008375
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1888 10 438 Glycosyltransferase AT4G38240 71.860 0.0 658
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1888 K00726 - gmx:100795005 816.994