Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1886 ATGATTCAACAAGGTATAGATTCTAAATTTTGTGAGCATAGTCTGAGCAATTTTAAAATGGACTTGCCTAATCGTGATAAACAACTGACTGTTGCTGTGAAGAAGACAGCATTGAGAGATGTGCAGAATGATAATAAAATTGTGGTGCCAACTGCTGTTGGAAGCTCTTCATTTTTAAAGGATAAGGATCCTGGTATTGATTCTAATAAAGTTTCTGGCACCAAGAGACCCTCATCTGACTACCCAGTGAATCACCATCTCCAACAATCTCCAAGCAGTAATGCTGCTAATGGACATCTTGTGTATGTACGTAGAAAATCAGAAGCAGAATTGGGAAAGAGCACTGCTTTTGAAAATCCAAGTATTAATGCTTATTGTCCACATTCCAGGCAACTTTGCTGTGAAGAGCAGACTGCTCAACCAAAATCTCAGATAGGGGAACCACCTCAGATAAAGGAACCAAAGGTTTCTAGTTTTCCTGCATTTTCACCTTTTCCTCTAGCTTCTTCAATGAACTCATCTGGAAAGCCTTCAGTTTCTATTTCTCTTGGGAAGTCTGCCACAAAGTTAGCACAAGTTGAGTCCAGTTATGTGATAGCTTCTTCTGGCCCTACTACCATTGGTAATCCAAAGGGATTAAAAAATTTGCACTGGGAGGAACGATACCAACAAATGCAGATGTTTTTGAGGAAATTGGACCAATCAGATCAAGAAGATTATATCCAAATGCTTCAATCCCTGTCCTCGGTTGAACTTAGCAAACAAGCTGTTGAGTTAGAGAGGAGATCAATTCAGCTTTCATTGGAGGAAGCTAAAGAATTGCAGCGTGTTGCTGTTTTAAATGTTTTGGGAAAATCAGTGAAGAAGTTCAAAGTGCCAGCAGACCATGACGAATAA 897 0.3958 MIQQGIDSKFCEHSLSNFKMDLPNRDKQLTVAVKKTALRDVQNDNKIVVPTAVGSSSFLKDKDPGIDSNKVSGTKRPSSDYPVNHHLQQSPSSNAANGHLVYVRRKSEAELGKSTAFENPSINAYCPHSRQLCCEEQTAQPKSQIGEPPQIKEPKVSSFPAFSPFPLASSMNSSGKPSVSISLGKSATKLAQVESSYVIASSGPTTIGNPKGLKNLHWEERYQQMQMFLRKLDQSDQEDYIQMLQSLSSVELSKQAVELERRSIQLSLEEAKELQRVAVLNVLGKSVKKFKVPADHDE* 299
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1886 298 Coils Coil 254 274 - -
Apr5g1886 298 Pfam Retinal tissue protein 222 283 IPR018737 GO:0006355|GO:0070176
Apr5g1886 298 PANTHER INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN 1 289 - -
Apr5g1886 298 MobiDBLite consensus disorder prediction 71 94 - -
Apr5g1886 298 PANTHER INTEGRAL MEMBRANE HEMOLYSIN-III-LIKE PROTEIN 1 289 - -
Apr5g1886 298 MobiDBLite consensus disorder prediction 58 94 - -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1886 - - gmx:100803861 518.079
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1886 5 21887371 21893786 Apr5g1886 5 21887371 21893786 ECH