Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1883 ATGGAGAACAGGGAAATACTGCGGGAATGGTTTGACCGAGTCGACTCGGAGAAAAATGGAAGCATAACAGCGCTCCAACTCAAGACAGCTCTAGCTGTGGGCAACCTGGAATTTCCCCTCTCAGTTGTTGAGCAGATGATCAGGATGTACGATTTCGACAGGAATGGTACGATGAGCTTTGAAGAATTTGTTGCACTCAACAAGTTCCTTCTTAAGGTTCAACATGCATTTTCTGATCTAGAGAGGGGTCGTGGTTTTCTTGTACCCGATGATGTATTTGAGGCTTTGGTAAAAATTGGTTTCATGCTGGATTCTCCTGCTTTTTACTCTGTCTGTGAGAGCTTTGATCGAAGTAAAAATGGGAGGTTTCAGCTGGATATCTTCATATCAATCTGTATATTCTTACAATCAGCTCGGAATCTGTTTAATTCATTTGATATAGCGAAACATGGCAGAGTTACTCTTGATCTGAATCAGTTTGTCTATTGTAATGTTGTATGCAAACACGAATACAATACCAATTGCGCACGCAGGGGCGGCAGGGCTTCTACATTGTTTCAGAAGAAACGTACGGTAATATTAAAGCTGCCAGATCTTTTATTTTAA 606 0.4125 MENREILREWFDRVDSEKNGSITALQLKTALAVGNLEFPLSVVEQMIRMYDFDRNGTMSFEEFVALNKFLLKVQHAFSDLERGRGFLVPDDVFEALVKIGFMLDSPAFYSVCESFDRSKNGRFQLDIFISICIFLQSARNLFNSFDIAKHGRVTLDLNQFVYCNVVCKHEYNTNCARRGGRASTLFQKKRTVILKLPDLLF* 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1883 201 ProSitePatterns EF-hand calcium-binding domain. 51 63 IPR018247 -
Apr5g1883 201 ProSiteProfiles EF-hand calcium-binding domain profile. 2 37 IPR002048 GO:0005509
Apr5g1883 201 Gene3D - 1 167 - -
Apr5g1883 201 SUPERFAMILY EF-hand 3 163 IPR011992 -
Apr5g1883 201 ProSiteProfiles EF-hand calcium-binding domain profile. 38 73 IPR002048 GO:0005509
Apr5g1883 201 PANTHER PEFLIN 5 164 - -
Apr5g1883 201 SMART efh_1 6 34 IPR002048 GO:0005509
Apr5g1883 201 SMART efh_1 42 70 IPR002048 GO:0005509
Apr5g1883 201 PANTHER PEFLIN 5 164 - -
Apr5g1883 201 Pfam EF hand 43 66 IPR002048 GO:0005509
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1883 7 128 EF-hand Containing Proteins AT4G04740 25.781 3.96e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1883 - - aprc:113866014 404.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1883 5 21858754 21873649 Apr5g1883 5 21858754 21873649 ECH