Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1862 ATGGCTGTTTCCGCCATCACGGGACCAAGGCTTACACTTGGAACATCCCTTTCCACTCCCAAACGACCTCGAGCTCCTTCGATCACAATGGCCGTATCCGTTGACAAGAAGTCCGACATAAATCTCACTCTTCGCAAGTCCGAGGAAGCTTTCGCTGCTGCCAAGGAATTGATGCCTGGAGGGGTGAATTCCCCAGTTCGTGCCTTCAAATCTGTAGGTGGCCAACCAATTGTGATCGATTCGGTGAAAGGGTCTCATATGTGGGACATTGACGGCAACGAGTATATTGACTACGTGGGTTCCTGGGGTCCTGCAATTATTGGTCACGCCGATGATCAGGTGCTTGCAGCTCTTGCTGAAACGATGAAGAAAGGAACAAGCTTTGGAGCACCCTGTTTGCTGGAAAACACTTTGGCGGAACTGGTTATCTCTGCGGTTCCCAGCATTGAAATGGTTAGGTTCGTTAATTCGGGAACTGAGGCCTGCATGGGTGCTCTTCGCTTGGCCCGTGCTTACACTGGCAAAGAGAAGATAATAAAGTTTGAGGGGTGTTACCATGGTCATGCCGATCCCTTTCTTGTTAAGGCTGGTAGTGGAGTTGCCACCTTAGGACTTCCTGATTCTCCTGGGGTTCCCAAAGCTGCTACTTATGAAACTCTCACCGCCTCTTATAATGATTCTTCTGCAGTTCAGAATCTTTTTGAGGCTAACAAGGGAGAGATTGCTGCAGTTTTCCTTGAACCTGTAGTTGGAAATGCTGGTTTCATAGTTCCTACACCTGATTTTCTTGGTTTCTTGAGAAAAATCACCAAGGAGAACAATGCCCTTCTTGTGTTTGATGAAGTCATGACTGGATTTCGTTTGTCATATGGAGGAGCTCAAGAATATTTTAGCATAACACCGGATTTAACGACTCTAGGGAAAATCATTGGTGGGGGTCTGCCAGTGGGTGCTTATGGAGGGAGGAGGGATATTATGGAGATGGTGGCGCCGGCTGGACCGATGTACCAGGCTGGGACCTTGAGTGGGAATCCTTTGGCCATGACTGCGGGCATACACACCCTGCAGCGAATTAAGGAGCCAGGAACTTACAAGTACTTGGACAAGATTACAGGGGAACTTGTTCAAGGTATCATTGAAGCTGGGAAGAGGGCAGGGCATGCAATCTGTGGTGGGCATATAAGTGGGATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGTACAATTTTGCAGATGCCAAAAAGAGTGACACTGCCAAGTTTGCTAGGTTCTTCTGGGGAATGTTAGCAGAAGGTGTGTATTTGGCACCTTCGCAGTTTGAGGCTGGGTTCACCAGCTTGGCACATACTTCTGATGACATAAAAAAGACAATAGCCGCTGCAGAGAAGGTTTTCAGGGAGATCTGA 1407 0.4805 MAVSAITGPRLTLGTSLSTPKRPRAPSITMAVSVDKKSDINLTLRKSEEAFAAAKELMPGGVNSPVRAFKSVGGQPIVIDSVKGSHMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALAETMKKGTSFGAPCLLENTLAELVISAVPSIEMVRFVNSGTEACMGALRLARAYTGKEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATYETLTASYNDSSAVQNLFEANKGEIAAVFLEPVVGNAGFIVPTPDFLGFLRKITKENNALLVFDEVMTGFRLSYGGAQEYFSITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLQRIKEPGTYKYLDKITGELVQGIIEAGKRAGHAICGGHISGMFGFFFTEGPVYNFADAKKSDTAKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1862 468 PANTHER BNAA09G06670D PROTEIN 25 466 - -
Apr5g1862 468 CDD OAT_like 51 465 IPR005814 GO:0008483|GO:0030170
Apr5g1862 468 TIGRFAM hemL: glutamate-1-semialdehyde-2,1-aminomutase 46 467 IPR004639 GO:0033014|GO:0042286
Apr5g1862 468 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 46 468 IPR004639 GO:0033014|GO:0042286
Apr5g1862 468 Pfam Aminotransferase class-III 76 385 IPR005814 GO:0008483|GO:0030170
Apr5g1862 468 Gene3D - 112 360 IPR015421 GO:0003824
Apr5g1862 468 SUPERFAMILY PLP-dependent transferases 45 467 IPR015424 -
Apr5g1862 468 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 277 313 IPR005814 GO:0008483|GO:0030170
Apr5g1862 468 Gene3D Aspartate Aminotransferase, domain 1 49 461 IPR015422 GO:0003824
Apr5g1862 468 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 25 466 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1862 Apr-Chr5 21725757 21727667 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1862 K01845 - gmx:547795 848.58