Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1845 ATGGCGATGGCTTTCAAGATGGCTACCACTGGAATGTGGGTAACGGATGAGTGCAAGAACTCGTTCATGGATATGAAGTGGAAGAAGGTGCACAGATACATAGTGTTCAAGATCGACGAAGGATCCAGGCTCGTCACTGTCGATAAACTCGGTGGCCCCACCGAAAACTATCATGATCTCACCGCCTCCTTGCCCACCGATGATTGCCGATATGCTGTCTTTGACTTCGACTTCGTCACCGTTGATAACTGCCGCAAGAGCAAGATCTTCTTCATCGCATGGTCTCCTACGGCATCAAGGATTAGAGCAAAGATGCTATACGCAACTTCCAAGGATGGGCTGCGAAGAGCGTTGGATGGAATCCACTATGAACTTCAGGCCACCGAACCAACCGAGATGGGTTTCGATGTAATTAGAGACATAGCCAAATAG 432 0.4884 MAMAFKMATTGMWVTDECKNSFMDMKWKKVHRYIVFKIDEGSRLVTVDKLGGPTENYHDLTASLPTDDCRYAVFDFDFVTVDNCRKSKIFFIAWSPTASRIRAKMLYATSKDGLRRALDGIHYELQATEPTEMGFDVIRDIAK* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1845 143 PANTHER COFILIN-RELATED 5 143 IPR017904 GO:0015629|GO:0030042
Apr5g1845 143 PANTHER ACTIN DEPOLYMERIZING FACTOR 5-RELATED 5 143 - -
Apr5g1845 143 SUPERFAMILY Actin depolymerizing proteins 6 140 - -
Apr5g1845 143 Gene3D Severin 8 143 IPR029006 -
Apr5g1845 143 ProSiteProfiles ADF-H domain profile. 11 143 IPR002108 GO:0003779
Apr5g1845 143 SMART adf_2 16 143 IPR002108 GO:0003779
Apr5g1845 143 CDD ADF_cofilin_like 10 140 IPR017904 GO:0015629|GO:0030042
Apr5g1845 143 Pfam Cofilin/tropomyosin-type actin-binding protein 18 139 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1845 Apr-Chr5 21594755 21595753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1845 K05765 - gmx:100785493 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1845 5 21594755 21595753 Apr5g1845 5 21594755 21595753 ECH