Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1839 ATGGCATCGGACAAAGAGGTTGAAAGTGTAATAGTGGGGAACTATATGGAAATGGAAACTGAAGGGAAGCCTAAGGATATTAAATCCAGGTTATTAAGCATGCTATGGCATGGGGGTTCTGTTTATGATGCCTGGTTTAGCTGTTCTTCAAACCAGGTGGCTCAAGTTCTGCTTACGTTGCCGTACTCATTTTCCCAGCTAGGAATGCTTTCTGGAACTCTTTTTCAACTCTTCTACGGCTTGATGGGTGGGTGGACGGCTTACCTCATCAGCACACTCTATGTTGAATACAGAACCAGAAAAGAGAGAGAGAAAGTTAATTTCAGGAACCATGTCATCCAGTGGTTCGAGGTTCTTGATGGGCTCCTCGGGAGCCATTGGAGAAATGTGGGTTTGGCCTTTAACTGCACATTTCTTCTATTTGGAGCTGTAATCCAACTCATAGCTTGTGCAAGCAACATATATTACATAAATGACAATCTAGACAAGAGGACTTGGACTTACATCTTTGGAGCATGCTGTGCCACCACTGTATTTATCCCTTCCTTCCACAACTACAGAATTTGGTCCTTTCTGGGCCTCCTCATGACCACTTACACTGCTTGGTACCTTGCTGTTGCCTCTCTCCTTCATGGCCAGGTGGAAGGGATTAAGCATTCGGGTCCAACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCCGTCACTGTGGAGATAATGCACGCGATGTGGAAGCCTCAAAAATTTAAGGCCATATACTTACTGGCTACTCTGTATGTGCTTACACTGACGCTCCCATCAGCAGCTGCAGTATACTGGGCATTCGGAGATATGCTTCTAAATCACTCCAACGCTTTTTCTCTCCTTCCAAGATCACCCTTCCGGGACATGGCTGTCATTTTAATGCTCATTCACCAGTTTATAACATTTGGGTTTGCATGCACGCCACTATATTTGATGTGGGAGAAAGCAATAGGGATACACGAGTGTAAGAGCTTGTGCAGGCGTGCTTTGGCGAGATTACCAGTGGTGATCCCCATATGGTTCTTGGCCATAGTTTTCCCCTTCTTTGGACCCATTAACTCCACCGTTGGATCCCTACTTGTCAGCTTCACCGTTTACATCATCCCTGCCCTCGCCCACATGTTCGCCTTCAAATCACCTGCTGCTCGAGAGAATGCGGTGGAGCAACCTCCCAGGTTCGTGGGAAGATGGGTGGGTGCCTACACGATCAACGTATTTGTGGTGGTGTGGGTCCTAGTGGTAGGCTTTGGATTCGGTGGATGGGCGAGTATGGTCAACTTCATACACCAGATTGATACATTCGGTTTCTTCACCAAATGTTATCAGTGTCCAAGTACATTTCCTTCTATGCTGAACGCCACCGCGCCTTCCCCTCGTCGTCACTGA 1437 0.469 MASDKEVESVIVGNYMEMETEGKPKDIKSRLLSMLWHGGSVYDAWFSCSSNQVAQVLLTLPYSFSQLGMLSGTLFQLFYGLMGGWTAYLISTLYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGSHWRNVGLAFNCTFLLFGAVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLAVASLLHGQVEGIKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFSLLPRSPFRDMAVILMLIHQFITFGFACTPLYLMWEKAIGIHECKSLCRRALARLPVVIPIWFLAIVFPFFGPINSTVGSLLVSFTVYIIPALAHMFAFKSPAARENAVEQPPRFVGRWVGAYTINVFVVVWVLVVGFGFGGWASMVNFIHQIDTFGFFTKCYQCPSTFPSMLNATAPSPRRH* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1839 478 PANTHER OS05G0424000 PROTEIN-RELATED 3 465 - -
Apr5g1839 478 Pfam Transmembrane amino acid transporter protein 37 429 IPR013057 -
Apr5g1839 478 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1839 Apr-Chr5 21564315 21568440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1839 4 460 Organic Solute Cotransporters AT2G21050 86.433 0.0 851
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1839 K13946 - gmx:100794079 912.909
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1839 5 21564315 21568440 Apr5g1839 5 21564315 21568440 ECH