Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1830 ATGATGAGGGGTCAGAGAAAGCCGATACACGCGATCGCCACGTGGGTGCGGCGGCAACCGCCAAAGGTGAAGGCTTTTCTTGCCGTTGTTTCGGGCATGGCGGCACTCGTGCTTCTCCGCTTCATCGTTCACGATCACGATAACCTTTTCGTTGCTGCCGAGGCTGTCCACTCTCTTGGAATTTCCGTTCTCATCTATAAACTCATCAAAGAAAAGACTTGTGCCGGATTATCGCTCAAATCCCAGGAATTAACAGCTATATTTTTAGCTGTTAGGCTGTACTGCAGTTTTGTCATGGAATATGATATACATACCCTGCTTGATTTGGCTACTTTGGCAACAACACTGTGGGTTATATACATGATTCGTTTTAAATTGAAGTCTAGTTACATGGAAGAGAAGGACAATTTTGCAATATACTATGTGGTGGTACCCTGTGCTGTGTTAGCCTTGTTTTTTCATCCATCAACTATTCATCATTTATTGAACAGGATTTTCTGGGCATTCTGTGTATATCTTGAAGCTGTGTCAGTACTACCTCAATTGCGAGTCATGCAGAACACCAAAATTGTTGAGCCATTCACAGCACACTATGTGTTTGCCCTGGGTGTTGCAAGATTCTTGAGCTGTGCTCATTGGGTTCTTCAGGTGTTGGATAGCCGTGGACATTTGTTGGTTGCCTTGGGGTATGGATTATGGCCATCAATGGTGCTTATTTCAGAAATAGTCCAGACTTTTATCCTAGCAGATTTCTGTTACTATTATGTCAAAAGCGTTTTTGGGGGACAACTTGTTCTCCGCCTTCCCTCTGGAGTTGTGTGA 822 0.4404 MMRGQRKPIHAIATWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGISVLIYKLIKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFKLKSSYMEEKDNFAIYYVVVPCAVLALFFHPSTIHHLLNRIFWAFCVYLEAVSVLPQLRVMQNTKIVEPFTAHYVFALGVARFLSCAHWVLQVLDSRGHLLVALGYGLWPSMVLISEIVQTFILADFCYYYVKSVFGGQLVLRLPSGVV* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1830 273 PRINTS ER lumen protein retaining receptor signature 49 68 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g1830 273 PRINTS ER lumen protein retaining receptor signature 76 96 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g1830 273 PRINTS ER lumen protein retaining receptor signature 167 187 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g1830 273 PRINTS ER lumen protein retaining receptor signature 189 203 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g1830 273 PRINTS ER lumen protein retaining receptor signature 203 221 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g1830 273 PANTHER ER LUMEN PROTEIN RETAINING RECEPTOR 2 272 IPR000133 GO:0006621|GO:0016021|GO:0046923
Apr5g1830 273 PANTHER ER LUMEN PROTEIN-RETAINING RECEPTOR C28H8.4-RELATED 2 272 - -
Apr5g1830 273 Pfam ER lumen protein retaining receptor 73 215 IPR000133 GO:0006621|GO:0016021|GO:0046923
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1830 Apr-Chr5 21507045 21514069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1830 6 273 Miscellaneous Gene Families AT2G21190 87.687 3.34e-180 494
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1830 - - jre:108986989 520.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1830 5 21507045 21514069 Apr5g1830 5 21507045 21514069 ECH