Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1826 ATGGGTATTCGTCTGCAATTCATGGCTCTTCATGCCAACAAGATATTCAAGTGGCAGCAGCATCTTCAGAGTAGAAATCAGTCAAATGTTCCAAAGGGTCACGTAGCAGTGTATGTTGGAGAGGCTCAGAAGAAGCGGTTTGTGGTTCCAATATCTTACCTGAACCATCCTTCTTTTCTTGACTTGCTAAACCGAGCTGAGGAAGAGTTTGGCTACAATCATCCAATGGGGGGTCTCACTATCCCTTGCAAAGAAGAAGCATTCATCACTCTTACCTCTCAACTGCGTTCCTCCTGA 297 0.4512 MGIRLQFMALHANKIFKWQQHLQSRNQSNVPKGHVAVYVGEAQKKRFVVPISYLNHPSFLDLLNRAEEEFGYNHPMGGLTIPCKEEAFITLTSQLRSS* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1826 98 Pfam Auxin responsive protein 13 93 IPR003676 GO:0009733
Apr5g1826 98 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 97 - -
Apr5g1826 98 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1826 Apr-Chr5 21488977 21489273 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1826 17 98 Calmodulin-binding Proteins AT4G34750 45.556 1.47e-16 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1826 K14488 - gmx:102663761 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1826 5 21488977 21489273 Apr5g1826 5 21488977 21489273 ECH