Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1822 ATGGGCTTTCGCTTACCTGGTATTAGACGATCATCATCTAGTGCAAGCCAACAATCTTCTTGCAAGGTGATGGAAGTTCCAAAAGGGTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCAATTTCATTCTTGAATGAGCCTTTATTTCACGGATTGCTTAGCCAAGCTGAAGAGGAGTTTGGTTACTCTCATCCTATGGGTGGTCTTACAATTCCCTGCAAGGAAGATGAGTTCTTAGATATAACTTCTCGCTTGAACAGGCTATGA 282 0.4149 MGFRLPGIRRSSSSASQQSSCKVMEVPKGYLAVYVGEKMKRFLIPISFLNEPLFHGLLSQAEEEFGYSHPMGGLTIPCKEDEFLDITSRLNRL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1822 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 2 91 - -
Apr5g1822 93 MobiDBLite consensus disorder prediction 1 20 - -
Apr5g1822 93 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Apr5g1822 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr5g1822 Apr-Chr5 21464000 21464333 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr5g1822 12 83 Calmodulin-binding Proteins AT3G43120 47.368 1.50e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1822 K14488 - gmx:100500615 158.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1822 5 21464000 21464333 Apr5g1822 5 21464000 21464333 ECH