Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr5g1815 ATGCTTCTACCGGCACTGGTACCATGGTGTCCATATCCATGGCGGCATGGCACGATGCCGACACTCACAGTGACTTCAATTCCAATGGGAATTTTGAGAGGGAGAGGGAGAGGGAAGGAGGTTGTTGGTTGCAGAATAAGGTGCATGGCGAATCCGAGGAGAGTGAAAATGGTGGCCAAACAAATAAGGAGGGAGCTTTCTGATATGCTCATCACGGATAAAGTCTTGCAGTATGCTATCCTTCCAGAAGCTTCCTTAGGAGCTGACCGCTACCTCTCTTCCCTCACCACCATCACCGACGTCCATGTCTCCGGTGATTTGCAGGTGGTTAAGGTGTATGTATCCGTTTTTGGAGATGAAAGAGGGAAGGAAGTAGCCATTGCAGGCTTGAAGTCAAAGGCTAAATACGTTCGCAGTGAGTTGGGGAAGCGTATGAAGTTGCGCTTAACTCCTGAGATACGCTTTATAGAGGATGATTCTTTTGAGAAAGGGAGCAGGGTGATTGCAATATTAGATAAAATAAAGAATGAGAAGAGTCAAAACAAGGAGCAATTCAATTCTTCTGCGCAAGAAGAGGACGATGATTGGGATGGTGAAGACCCTGATGAAGGTATCATTTATGTGGAATAG 630 0.4635 MLLPALVPWCPYPWRHGTMPTLTVTSIPMGILRGRGRGKEVVGCRIRCMANPRRVKMVAKQIRRELSDMLITDKVLQYAILPEASLGADRYLSSLTTITDVHVSGDLQVVKVYVSVFGDERGKEVAIAGLKSKAKYVRSELGKRMKLRLTPEIRFIEDDSFEKGSRVIAILDKIKNEKSQNKEQFNSSAQEEDDDWDGEDPDEGIIYVE* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr5g1815 209 MobiDBLite consensus disorder prediction 179 209 - -
Apr5g1815 209 TIGRFAM rbfA: ribosome-binding factor A 49 176 IPR000238 GO:0006364
Apr5g1815 209 Hamap Ribosome-binding factor A [rbfA]. 53 171 IPR000238 GO:0006364
Apr5g1815 209 MobiDBLite consensus disorder prediction 190 209 - -
Apr5g1815 209 Gene3D - 49 165 IPR015946 -
Apr5g1815 209 PANTHER RIBOSOME-BINDING FACTOR A, CHLOROPLASTIC-RELATED 45 209 IPR000238 GO:0006364
Apr5g1815 209 SUPERFAMILY Ribosome-binding factor A, RbfA 49 174 IPR023799 -
Apr5g1815 209 ProSitePatterns Ribosome-binding factor A signature. 137 158 IPR020053 GO:0006364
Apr5g1815 209 Pfam Ribosome-binding factor A 54 170 IPR000238 GO:0006364
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr5g1815 K02834 - gmx:100812407 285.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr5g1815 5 21418849 21420363 Apr5g1815 5 21418849 21420363 ECH